Protein

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Genbank accession
QLF88309.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MANSFVRYTGNGSTTAYSISYTYRDAADLIVSINGVATTSYSLNAAGTTLTFDTAPANASSIEIRRKTSQTTRLTDYAAGSVLTENDLDTDSTQAFFMGQEAIDDANDVIKISSTDFQYNAGNKQIRNVANPTSNQDVATKNYLENTFLTTANKTALTTINANIANIIAVNNNATNINSAVSNSTNINLVANNIGSVNVVATDIAKVIEVANDLQEAVSEVETVADDLNEATSEIDTVAVNIANVNLVGNSISNVNALAPKVTELGLLGTSAVVTDLGILGTSANVTAMGHLGTSANVTAMGLLGTSAVVTDMGLLGTSANVTAMGLLGNSTVISNISTVSSKNTEIGLLGTSANVTAMGNLGTSANVTAMGLLGTSSVVTDMGILGTSSNVSNMSTLAGISGLSTLASNNANITAVAGKVTEIGLLGTSANVSNMATLGTSTNVSNMSTLAGITNLNNLANAHASVTSVANNLASVNSFANTYLGASGSAPTQDPDGSALDLGDLYFDTGSNQLKVYSSTGWVNAGSSVNGTSDRFKYTVSGTPTTISGNDDNSNSLSYDAGFIDVFLNGIKMVNGTDVTVTSGNSVVFASALTNGDVVDIITFGTFNIASMNASNLSSGTVPDARITGAYTGITNLTMSGDLNVASNVLFVDASASTVGLGTNSPNHKLELLGGSPAISIKSNNTTNGSSNILFGDTNDDDIGKIFYEHGTNSFRFLTNASERMRIEANGLVRIKNTSHTNSLITNNHNLVIGNESSSAHGLAILSPTNENGYISFFDSGNSGSFRGTLNYNHNDDSLRTYVNGSERIRINSSGNLLVGKTSTTRTVAGAELRPDGFIRGTKNSAHSIDAVRTTDDGDVIRLYKDNNIAGVLGTQNWGIGTSSPTEALEVTGNLKINSTGSVMEGISITPASAGSTSLLLNTFNGGVANDRNWAIRNRYNANGRLEIMRSTNNTGDSLTPVMTFERDGDVVVKQNLYVDASGAGIFLGGASTNNKLEDYEEGTWTPVVNAASGFSTGITSTTNAKYTKIGNMVNVRVNFQMGNSSGNLAIEDNVTVTGLPYTASHTEQSQCCAYRYNVNNGVFHVYLSTTSAIFVRCHYVNGSPPRNGGSISLNYTYQTT
Physico‐chemical
properties
protein length:1122 AA
molecular weight: 116374,68890 Da
isoelectric point:4,72351
aromaticity:0,05704
hydropathy:-0,08173

Domains

Domains [InterPro]
IPR005604
ATT
3–114
IPR005604 DC_0265 DC_0467
DC_0265
STR
28–154
DC_0265 Coil DC_2093
QLF88309.1
1 1122
Architecture
ATT
STR
ATT 3-114 | STR 115-1122
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLF88309.1
1 1122
Domain Start End Length (AA) Confidence
N-terminal 1 428 428 0,7362
Central domain 429 627 200 0,1755
C-terminal 628 1122 494 0,9075
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-428
Central
429-627
C-terminal
628-1122

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage Himinglaeva EXVC011P
[NCBI] 		2736230 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp
[NCBI] 		2024849 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF88309.1 [NCBI]
Genbank nucleotide accession
MT375526.1 [NCBI]
CDS location
range 14372 -> 17740
strand +
CDS
ATGGCTAATTCATTTGTAAGATATACAGGTAATGGCTCTACAACTGCTTACTCTATATCTTATACTTATAGAGACGCAGCAGATTTAATTGTGAGCATCAACGGTGTCGCTACTACATCTTATTCATTAAATGCTGCGGGAACTACTTTAACATTTGACACGGCTCCTGCTAATGCGAGTTCTATAGAAATTCGTAGAAAAACTTCTCAAACAACAAGATTAACAGATTATGCTGCGGGTTCAGTTCTTACTGAAAACGATTTAGATACAGACAGTACTCAAGCATTCTTTATGGGTCAAGAAGCCATTGATGATGCTAATGACGTAATTAAAATTTCAAGCACAGACTTTCAATATAATGCAGGCAACAAACAAATAAGAAATGTTGCTAATCCAACTTCCAATCAAGACGTTGCTACTAAAAACTATTTAGAAAATACTTTTTTAACTACAGCCAACAAAACAGCTTTAACTACAATTAACGCTAACATAGCTAATATTATTGCAGTAAACAATAATGCTACTAATATTAACTCAGCAGTTTCAAATTCAACTAACATAAATTTAGTGGCAAACAACATTGGTTCAGTAAATGTTGTTGCAACTGATATTGCAAAAGTTATAGAAGTTGCAAACGATTTACAAGAAGCAGTTAGTGAAGTAGAGACTGTTGCAGATGATTTAAATGAAGCAACTTCAGAAATTGATACAGTAGCAGTAAATATTGCTAATGTTAACCTTGTTGGAAATTCAATAAGCAATGTAAATGCACTAGCACCTAAAGTTACAGAATTAGGATTATTAGGTACGTCAGCAGTAGTTACTGATTTAGGAATACTTGGAACGTCAGCTAATGTAACAGCTATGGGTCACTTAGGTACTTCAGCTAATGTTACTGCAATGGGTTTACTTGGTACAAGTGCAGTTGTTACAGACATGGGATTACTTGGTACTTCTGCAAATGTTACTGCAATGGGATTACTTGGTAATTCAACAGTAATTTCAAACATATCAACAGTATCAAGTAAAAATACTGAAATAGGTTTATTAGGTACTTCAGCTAATGTAACAGCTATGGGTAACTTAGGGACTTCAGCTAATGTTACAGCAATGGGATTATTAGGAACATCAAGCGTTGTTACAGACATGGGAATTTTAGGTACATCATCAAATGTATCTAACATGTCTACACTAGCAGGTATTAGTGGATTAAGCACACTTGCTTCTAACAATGCAAATATTACAGCAGTAGCAGGAAAGGTTACTGAAATAGGTTTATTAGGTACTTCAGCTAATGTTTCTAACATGGCAACTTTAGGCACTTCAACAAATGTGTCTAATATGTCCACACTTGCAGGAATTACAAATTTAAATAATTTAGCTAATGCACACGCTTCAGTTACAAGTGTGGCTAATAATTTAGCTTCAGTAAACAGTTTCGCAAACACTTATTTAGGTGCATCAGGTTCAGCACCAACGCAAGACCCAGATGGTTCAGCATTGGATTTAGGAGATTTATATTTTGATACAGGTTCAAACCAACTAAAAGTTTACTCATCAACTGGTTGGGTCAATGCAGGTTCTTCAGTAAATGGAACTTCAGATAGATTTAAGTACACAGTATCAGGAACACCTACAACTATTTCTGGTAATGATGATAATTCAAATTCACTTTCTTATGACGCAGGATTTATAGACGTTTTCCTAAATGGAATTAAGATGGTAAATGGAACAGACGTTACTGTAACAAGTGGTAACTCTGTTGTCTTTGCTTCAGCTTTAACAAATGGCGATGTCGTAGATATTATAACTTTTGGTACGTTTAATATTGCTTCAATGAACGCATCAAATCTATCAAGTGGTACAGTACCAGATGCTAGAATTACTGGTGCTTATACAGGCATTACAAACCTTACAATGTCTGGCGACTTAAATGTTGCTAGTAATGTTTTATTTGTAGATGCTTCTGCTTCTACAGTTGGTTTAGGAACTAACTCGCCAAATCATAAATTAGAACTACTTGGTGGTTCACCTGCTATTTCAATAAAATCAAATAACACAACAAATGGAAGTTCAAATATTTTATTTGGTGATACAAATGATGATGATATTGGAAAAATATTTTATGAGCATGGAACAAACTCATTTAGATTTTTAACAAATGCTAGTGAACGTATGCGTATTGAAGCAAATGGTTTAGTCAGAATTAAAAACACATCACACACAAATTCTTTAATAACAAATAATCATAACTTAGTAATAGGTAATGAAAGTTCTAGCGCACATGGTTTAGCAATATTATCACCAACAAATGAAAATGGTTATATAAGTTTTTTTGATAGTGGTAATAGTGGTTCATTTAGAGGTACATTAAATTATAATCATAATGATGATAGTTTAAGAACATACGTTAATGGCTCAGAACGTATACGTATCAACTCATCTGGAAATTTATTGGTGGGAAAAACCTCTACTACTAGAACAGTAGCAGGTGCAGAATTAAGACCAGATGGATTTATTAGAGGTACAAAAAATTCTGCTCATTCTATTGACGCTGTAAGAACAACTGATGATGGAGATGTAATAAGACTTTATAAAGACAATAATATTGCAGGAGTTTTAGGAACTCAAAATTGGGGTATTGGAACTTCATCTCCAACTGAAGCATTAGAAGTTACAGGAAATTTAAAAATTAATTCTACTGGAAGTGTAATGGAAGGAATATCAATTACACCTGCGTCAGCAGGTTCAACGTCATTACTTTTAAATACATTTAATGGTGGAGTTGCAAACGATAGAAACTGGGCTATTAGAAATCGTTATAATGCTAATGGTCGTCTTGAGATTATGCGTAGCACAAATAATACAGGAGATAGTTTAACACCAGTAATGACTTTTGAAAGAGATGGAGATGTAGTTGTTAAACAAAATTTATATGTAGATGCTTCTGGAGCAGGAATATTTCTTGGTGGAGCAAGCACAAATAACAAATTAGAAGATTATGAAGAAGGAACTTGGACACCAGTGGTTAATGCCGCAAGTGGATTTAGTACAGGAATAACTTCTACTACAAATGCCAAATATACAAAAATTGGTAACATGGTTAATGTTAGAGTTAATTTTCAAATGGGTAATTCTTCAGGAAATTTAGCAATTGAAGACAATGTTACAGTAACAGGACTACCTTACACAGCAAGTCATACAGAACAAAGTCAATGCTGTGCTTATAGATACAATGTTAATAATGGAGTTTTTCATGTTTACTTGAGCACTACATCTGCAATTTTTGTAAGATGTCATTATGTAAATGGTTCTCCACCTAGAAATGGTGGTTCAATATCACTTAATTACACATATCAAACAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a56ccc17577ec3c0c6b3dc691a59275682ed3ab89c955f0c6d361570d20c0eb3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6187
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50