Protein

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Genbank accession
AUR81435.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSLNDLLGAATQQESGTGVTESGAVVIGSTTAGEPTEIKTSTGNTVVTVTDDGGFQLSESQVVRQIVNAINVSDDDNDMKLPTVQAVMTFLAGAVTATIDFAEFTSKSDFDSFIATGGFIPTIAFVTDTTPFDYTDDTGHTGTDLTWMFVVCVEEDNVITTSMINNSDISSLTGDEIASIIAATEDVNFVNDSDLSRIRNLPDNTADALGGKVNSEVGKGLSQNNFTDAQRSKVDNSPSDTNTELGNKLDKQSTGVNVRVTNTGSGSGTYELENTTGDLDERLWRLKVKSTGSMTIEALDDGGGVTETFEFDQSGAIKAKTMKQNNYSVVATNDPMYVLLSAMFGVGSLTQDVVLQSDSSSVITLKVADNADSNGVAWQNTGSSYTMSVRRESVGSFTSDLVISMGLDNDLDQLTEVMRVRCDDGDSDTRLSLMVKALHAEDDITSNGNVMINSKNLGVQRDVATYKSSHPTISAITLAAYFAAEAKVEFLGTSSGSINMPVISTDPASDEVQAGTEISFCNFNSGSSADTTLVAPDSDHVFMVGNVGNVFTGSTIIQNASQVRIKARDYRSYSGIGKMCYVVVSA
Physico‐chemical
properties
protein length:587 AA
molecular weight: 62114,67390 Da
isoelectric point:4,18866
aromaticity:0,05963
hydropathy:-0,16797

Domains

Domains [InterPro]
DC_1916
STR
25–587
DC_1916
AUR81435.1
1 587
Architecture
STR
STR 25-587
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.005.O._10N.286.48.F2
[NCBI] 		1881414 No lineage information
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR81435.1 [NCBI]
Genbank nucleotide accession
MG592392.1 [NCBI]
CDS location
range 27511 -> 29274
strand +
CDS
ATGAGTAGTTTAAATGACCTTCTAGGCGCAGCAACGCAGCAAGAATCAGGCACGGGCGTAACAGAATCTGGCGCGGTTGTAATAGGGTCAACCACCGCAGGGGAACCGACAGAGATTAAAACGAGTACAGGCAACACGGTTGTTACTGTTACCGATGATGGAGGCTTTCAACTGTCAGAATCTCAAGTTGTTCGACAGATTGTTAACGCTATTAACGTTAGTGACGATGATAACGACATGAAGCTGCCAACTGTTCAGGCCGTCATGACATTCTTAGCTGGCGCTGTAACTGCGACGATCGACTTCGCTGAGTTTACAAGTAAGTCGGATTTTGATTCGTTCATTGCTACCGGCGGCTTTATTCCAACTATCGCATTTGTGACGGATACCACGCCCTTCGATTACACCGATGATACTGGTCACACAGGAACAGATTTGACATGGATGTTTGTCGTATGTGTTGAGGAAGATAACGTAATTACAACCTCGATGATTAACAACAGCGACATTTCAAGCCTAACCGGTGATGAGATCGCCAGTATTATTGCAGCAACTGAAGACGTGAACTTTGTTAACGACTCTGATTTATCTCGAATCAGAAACCTACCGGATAACACAGCGGACGCGTTAGGTGGCAAAGTTAACTCAGAGGTTGGCAAAGGCCTGTCGCAGAATAACTTCACAGACGCGCAGCGTAGTAAGGTTGATAACTCGCCATCTGACACAAATACCGAGCTAGGCAATAAGCTAGACAAGCAAAGCACTGGTGTAAACGTTCGGGTAACAAATACAGGCTCAGGAAGTGGTACTTATGAGCTAGAAAACACAACTGGAGACTTAGATGAAAGGCTTTGGCGACTAAAGGTTAAATCGACTGGCTCAATGACTATCGAGGCGCTAGATGATGGCGGGGGTGTTACTGAAACGTTTGAGTTTGACCAGTCAGGCGCAATCAAAGCCAAGACCATGAAGCAAAATAACTACTCTGTTGTCGCGACGAATGACCCCATGTATGTTCTTTTGTCTGCAATGTTTGGCGTTGGCTCTCTAACTCAGGATGTAGTTTTGCAGTCAGACAGCAGTTCAGTGATTACGCTTAAAGTTGCTGATAACGCAGACTCTAATGGTGTCGCTTGGCAAAATACCGGATCGTCGTACACAATGAGCGTTAGGCGCGAATCTGTTGGGTCTTTCACGTCCGACTTGGTTATCTCGATGGGGCTTGATAATGACTTAGATCAGTTAACAGAAGTTATGCGCGTTCGATGTGATGATGGTGATAGTGATACGCGACTTTCGCTCATGGTAAAAGCATTACATGCGGAGGATGATATCACCTCTAATGGCAATGTTATGATTAACTCTAAAAATCTAGGCGTACAGCGTGATGTTGCAACTTATAAGAGTAGCCATCCAACTATTAGCGCCATTACTCTTGCGGCATACTTTGCGGCTGAAGCTAAGGTTGAGTTCCTTGGTACGAGCTCAGGGTCAATTAACATGCCTGTAATTTCAACTGACCCAGCCAGTGATGAAGTGCAAGCAGGAACTGAGATCAGCTTCTGTAACTTCAATTCTGGTTCATCAGCTGATACGACGCTTGTAGCACCGGATTCTGACCACGTGTTTATGGTAGGCAATGTAGGCAATGTGTTTACAGGCTCAACTATCATTCAGAATGCTAGTCAGGTTCGAATTAAAGCGCGAGATTACCGGAGCTATAGTGGTATCGGCAAAATGTGCTATGTGGTAGTTTCAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ff6a6092c3b5fcc2bafd3a2de3f2c8447e808186cd7b9948a88293af45d58b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6392
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank