Protein

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Genbank accession
WMC01257.1 [GenBank]
Protein name
tail collar domain protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MPYQANVWKDGPDGRTPITAAKLTKIEDGVAAAQAEAERATTSATAARASLESVNNSYLSILNAIVPIGAVLPYYGGEPPRGWLPCYGQQVSRTEYPELFRVIGTRAGAGNGSTTFNVPDIRGRVVYGQGATGFTQTVGATVGETHHQLTVAELPAHGHEVVDFNNRSSYYRAAVSNTDIGVNDNGNGYTYATASGTNKFDRRPYANDVGGNTPIPIRPSGSVAAMIIRAK
Physico‐chemical
properties
protein length:231 AA
molecular weight: 24433,79790 Da
isoelectric point:7,84472
aromaticity:0,08225
hydropathy:-0,34502

Domains

Domains [InterPro]
DC_1651
STR
6–231
DC_1651
IPR037053
ATT
59–122
IPR037053
SSF88874
STR
63–230
SSF88874
IPR011083
ATT
69–126
IPR011083
WMC01257.1
1 231
Architecture
STR
ATT
STR
STR 6-58 | ATT 59-126 | STR 127-231
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudovirus D_HF2_7
[NCBI] 		3071194 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMC01257.1 [NCBI]
Genbank nucleotide accession
OR148984 [NCBI]
CDS location
range 14818 -> 15513
strand +
CDS
GTGCCGTATCAGGCGAACGTTTGGAAGGATGGCCCCGACGGACGCACTCCGATTACTGCCGCGAAGCTCACGAAGATCGAGGACGGTGTTGCTGCCGCCCAGGCCGAAGCGGAGAGGGCAACCACTTCAGCTACTGCCGCTCGCGCATCCTTGGAGAGCGTCAACAACTCCTACCTCTCGATCCTGAATGCGATCGTTCCTATCGGTGCGGTCCTCCCCTACTATGGGGGTGAGCCGCCTAGGGGGTGGCTGCCCTGCTACGGCCAGCAGGTGAGTCGCACAGAGTATCCCGAGTTGTTCAGGGTGATCGGCACGCGCGCTGGCGCCGGGAATGGGTCAACCACGTTCAATGTGCCTGACATTCGCGGGCGAGTTGTTTACGGTCAGGGTGCGACTGGTTTCACGCAGACCGTTGGTGCGACCGTTGGTGAAACCCACCACCAACTGACTGTTGCTGAGCTCCCTGCCCACGGCCACGAGGTCGTAGACTTCAATAACCGCTCCTCCTATTACCGTGCGGCAGTGTCAAACACTGACATTGGAGTCAACGACAACGGTAACGGCTACACTTACGCTACCGCGTCTGGCACCAACAAATTCGATCGCCGCCCCTACGCTAACGACGTTGGTGGCAACACTCCGATCCCGATCCGCCCCAGCGGCTCCGTGGCCGCAATGATTATCCGCGCTAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3439999617ba0120ae85bb9fd4f2cf719289e6afa6da6668ad6a20a66843598f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7909
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of diverse anelloviruses, cressdnaviruses, and phages in the human oral virome in North Carolina Paietta,E.N., Kraberger,S., Custer,J.M., Vargas,K.L., Epsy,C., Ehmke,E., Yoder,A.D. and Varsani,A. 2023-08-26 — GenBank