Protein

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UniProt accession
A0A8S5UTT3 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MSLKETISKELAPSLRKIGVDIKDLYKKIEDVSKNAFNQLTEEQRQTIKGPKGDAGQAGPPGPKGDVGPQGPPGPKGDVGPQGPPGAGGANVKLSMDQARGVLSIGSTGSDQVTLPDLKTFEWKSPEGTTWFKPNNRIRLVRKGQFVFAYIDGSRYGAVDLYRYGSSEMKDKKFVKETKMIDGKEITWYRVRLPDGRGGDKGHTIIPNGFRPTNDINGIVFGDSGTVVASLLFGSSGSLYSMRFQYEGHDASKHIIELLRLSPIIWITADNEPSEMNSPTDGTIRII
Physico‐chemical
properties
protein length:287 AA
molecular weight: 31239,03920 Da
isoelectric point:9,15343
aromaticity:0,07666
hydropathy:-0,55575

Domains

Domains [InterPro]
DC_0554
STR
8–287
DC_0554
IPR008160
STR
50–90
IPR008160
A0A8S5UTT3
1 287
Architecture
STR
STR 8-287
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctYA416
[NCBI] 		2825125 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF97896.1 [NCBI]
Genbank nucleotide accession
BK016136 [NCBI]
CDS location
range 110451 -> 111314
strand +
CDS
ATGTCACTAAAGGAAACGATATCCAAAGAATTAGCCCCTAGTCTGAGAAAGATAGGAGTTGATATCAAAGATCTATATAAAAAGATCGAAGATGTATCCAAGAATGCATTTAATCAATTAACAGAGGAACAACGACAAACTATTAAAGGCCCTAAAGGTGATGCAGGACAAGCTGGACCTCCTGGTCCAAAGGGTGATGTAGGTCCACAAGGCCCTCCAGGTCCAAAGGGTGATGTAGGCCCGCAAGGACCTCCTGGCGCTGGAGGAGCTAATGTCAAACTATCTATGGATCAAGCTAGAGGGGTTTTATCTATTGGTTCTACTGGATCTGATCAAGTAACTCTACCAGATTTAAAAACTTTTGAATGGAAATCTCCTGAAGGAACTACTTGGTTTAAACCTAATAATAGAATCAGACTTGTCCGAAAAGGACAGTTTGTGTTTGCATATATAGACGGATCAAGATATGGAGCCGTAGACTTATATCGATATGGAAGTTCCGAGATGAAAGATAAAAAATTTGTCAAAGAAACCAAAATGATAGATGGTAAAGAGATAACATGGTATAGAGTTAGATTACCTGATGGTAGAGGTGGAGATAAAGGCCATACTATCATACCTAATGGATTTAGACCTACAAATGATATTAATGGCATCGTATTCGGAGATTCTGGCACTGTTGTTGCTAGTCTATTATTTGGATCATCAGGAAGTTTATATAGTATGAGATTCCAATATGAAGGGCATGATGCTAGCAAGCATATTATAGAGTTATTACGACTGTCTCCTATTATATGGATAACAGCCGATAATGAACCTAGTGAAATGAATAGTCCAACTGATGGCACTATTAGAATTATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d0a238dfd42cc39ad6a43db3c72a98af4d03e541979c9b83134a28b0c894e56a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6289
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50