Protein

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UniProt accession
A0A8S5NZN5 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MAKFLDLNGLTHVIDKIKEWTNGSFRKKTEKVVSTDVTYNGKTLDEAIKTGEFKGEKGDAGAAGPQGPVGPAGPAGAKGEQGAQGPQGPAGEAFKIAKTFTSIAEMNKGFATDGVKTGQFVVIDTGNVQDEDNAKLYMKGAETYTYITDLSGATGLTGPQGPQGLQGAAGPAGPAGAKGEQGLQGPAGAKGERGETGPMGPQGLKGERGETGPMGPQGPAGSDANVEQISNEEIDALFRG
Physico‐chemical
properties
protein length:240 AA
molecular weight: 24279,60440 Da
isoelectric point:5,00993
aromaticity:0,05417
hydropathy:-0,60417

Domains

Domains [InterPro]
DC_0668
STR
7–128
DC_0668 IPR008160
IPR050149
Unmapped
53–222
IPR050149
IPR008160
STR
55–92
IPR008160 DC_0620
G3DSA:1.20.5.320
STR
194–239
G3DSA:1.20.5.320
A0A8S5NZN5
1 240
Architecture
STR
STR 7-239 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctNU74
[NCBI] 		2825471 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD99411.1 [NCBI]
Genbank nucleotide accession
BK015285 [NCBI]
CDS location
range 5101 -> 5823
strand -
CDS
ATGGCAAAATTCTTAGACTTAAATGGATTAACACACGTTATTGATAAGATTAAGGAATGGACAAACGGATCTTTCCGGAAAAAAACAGAAAAAGTAGTTTCGACAGATGTAACTTATAATGGCAAAACACTTGACGAAGCAATTAAAACAGGAGAATTTAAAGGGGAAAAAGGGGATGCTGGGGCAGCAGGACCACAAGGACCAGTAGGACCAGCGGGACCGGCTGGAGCTAAAGGAGAGCAGGGAGCACAAGGACCGCAAGGACCGGCAGGCGAAGCATTTAAAATCGCCAAAACATTTACATCTATAGCAGAAATGAATAAAGGGTTTGCGACAGACGGAGTAAAAACGGGACAATTTGTTGTGATCGACACCGGAAACGTACAAGATGAAGACAATGCAAAATTGTATATGAAAGGGGCAGAGACCTATACATATATCACAGACCTCTCCGGAGCCACTGGATTAACAGGGCCGCAAGGACCGCAGGGATTGCAGGGAGCTGCTGGACCGGCAGGACCGGCTGGAGCTAAAGGAGAGCAGGGCTTACAAGGCCCGGCAGGAGCTAAAGGAGAAAGAGGAGAAACAGGACCAATGGGACCACAAGGATTAAAAGGTGAAAGAGGAGAAACGGGACCAATGGGACCGCAGGGACCTGCTGGATCAGATGCAAATGTAGAGCAGATTTCAAATGAGGAGATTGATGCATTGTTTCGAGGCTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
3041aec0f810ec0605066e7bd6f06812eb6eb3844d49b0d8547b011c0b9ed7a1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5334
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50