Protein

View in Explore
Genbank accession
QZE50517.1 [GenBank]
Protein name
capsid decoration protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MAQIPASYSRKRDIAVAGQIADTSLYNIDGTCVAEGDIKAGVLVASTGAVSNGHKVVKPATAASDVVVGIAQFSQAYSPEGQYDDESAVNVMTHGRIWAVADATVTEKDCVFNSFVTFTANGTVAKGDAGVIKTGYRHTGEYTKNADGTVLVKVQVLQGFGNQPIGEQGPQGIQGIQGIQGPKGDKGDTGPQGPQGPKGDKGDPGPQGPKGDKGDPGTPAS
Physico‐chemical
properties
protein length:221 AA
molecular weight: 22484,62790 Da
isoelectric point:5,32822
aromaticity:0,05430
hydropathy:-0,39095

Domains

Domains [InterPro]
DC_2166
ATT
2–221
DC_2166
IPR054438
STR
4–155
IPR054438 PTHR24637
IPR008160
STR
166–218
IPR008160
QZE50517.1
1 221
Architecture
ATT
ATT 2-221
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnS-VAC4
[NCBI] 		2864362 Uroviricota > Caudoviricetes > Drexlerviridae > Webervirus VAC4 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZE50517.1 [NCBI]
Genbank nucleotide accession
MZ428222 [NCBI]
CDS location
range 23170 -> 23835
strand -
CDS
ATGGCACAGATTCCAGCTTCTTATTCCCGCAAGCGTGATATTGCAGTAGCGGGGCAGATCGCTGATACGTCACTTTACAATATCGACGGCACTTGTGTTGCTGAAGGCGATATCAAAGCTGGCGTACTAGTGGCTTCCACTGGCGCAGTTTCCAATGGCCACAAGGTCGTTAAACCAGCAACCGCAGCGAGCGACGTCGTTGTTGGCATCGCGCAGTTCTCGCAAGCCTACTCGCCGGAAGGCCAGTATGATGACGAAAGCGCAGTTAACGTTATGACTCATGGCCGCATTTGGGCTGTCGCAGACGCAACTGTTACTGAAAAAGATTGCGTCTTTAACTCCTTCGTAACCTTTACCGCCAATGGCACTGTAGCGAAGGGTGATGCCGGGGTTATCAAAACTGGCTACCGACACACTGGCGAATACACCAAAAACGCAGATGGCACTGTTCTGGTGAAAGTGCAGGTTTTGCAGGGTTTTGGTAATCAGCCGATTGGTGAGCAAGGCCCGCAGGGTATCCAGGGAATCCAGGGCATTCAAGGCCCAAAGGGTGACAAGGGCGACACTGGCCCGCAAGGCCCGCAAGGCCCGAAAGGTGACAAAGGCGACCCTGGCCCGCAAGGCCCGAAAGGCGACAAAGGCGATCCTGGAACGCCTGCTTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4c4fa3783c9bd56b2b96259f66f5ec4c68aad77df130b4a3dbe49da459c67026
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8626
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
PemIK (PemK/PemI) type II TA system from Klebsiella pneumoniae clinical strains inhibits lytic phage Bleriot,I.I., Blasco,L.L., Pacios,O.O., Fernandez-Garcia,L.L., Ambroa,A.A., Lopez,M.M., Gonzalez-Bardanca,M.M., Fernandez-Cuenca,F.F., Oteo,J.J., Pascual,A.A., Martinez-Martinez,L.L., Domingo-Calpa,P.P., Wood,T.T.K. and Tomas,M.M. 2021 — GenBank