Protein

View in Explore
Genbank accession
WBM84650.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVDTCNITGVCGTGDWNGPKPGDPNMSDLLLKATPAFGGIDIEFTWPTTNPGAVGTTRLFRSTSPDFSGATIRAFVSGNFYFDKTDPGSKVDQRYYYWIQLVSINGTDGDIIGPASATARPLIEQMIEQLTGEIDNGLLSQELRQEIAQIELNKLGITQEEIERAKNDDALGVRLTQIDAKMDQNTAILQEEVRARVTADSSLVQTVNTMYSDFNGNIAAIQQENIALSTRVNSLASSVTTINATVNGDSASGKVGLVAEVQTLDGKVTQIGARWTATVDVNGLVGGFGVYNDGNTVEAGFNVDRFWIGRPGTPKSPGSYPFIIDNNIVYIKEAAIQKLTFDKLRAQDGSFIVQNGKIQADYIEAKDIVVNNIQSDNYQPGVQGWAFRPNGIMEINGTAGTGRMTINNATIKVFDQAGKLRVHIGNLQA
Physico‐chemical
properties
protein length:429 AA
molecular weight: 46314,30120 Da
isoelectric point:4,69890
aromaticity:0,07459
hydropathy:-0,23333

Domains

Domains [InterPro]
DC_1153
STR
25–429
DC_1153
IPR013783
STR
31–117
IPR013783 Coil IPR015406
IPR053171
Unmapped
147–413
IPR053171
WBM84650.1
1 429
Architecture
STR
STR 25-429
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_PS28
[NCBI] 		3018996 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBM84650.1 [NCBI]
Genbank nucleotide accession
OQ134474.1 [NCBI]
CDS location
range 19011 -> 20300
strand +
CDS
ATGGTTGACACTTGCAACATCACAGGGGTCTGTGGAACTGGGGACTGGAATGGTCCTAAGCCAGGTGACCCCAACATGAGTGATCTACTCCTGAAGGCAACTCCTGCCTTCGGGGGTATCGACATTGAGTTCACTTGGCCTACTACCAACCCAGGTGCAGTAGGTACTACTCGACTGTTCCGTAGTACTTCCCCCGACTTCTCAGGTGCAACTATCCGTGCCTTCGTCAGTGGTAACTTCTACTTCGACAAGACGGACCCAGGCTCTAAGGTAGATCAGCGGTACTACTACTGGATTCAGTTGGTTTCGATCAACGGTACTGATGGGGACATCATTGGTCCTGCATCAGCAACTGCACGTCCACTCATCGAGCAGATGATTGAGCAGCTGACTGGTGAGATCGATAACGGACTCTTGTCACAAGAACTTCGGCAAGAGATCGCCCAGATCGAACTGAACAAACTGGGGATCACCCAGGAAGAGATTGAACGAGCCAAGAACGATGATGCTCTAGGTGTTCGTCTCACTCAGATCGACGCCAAGATGGATCAGAATACTGCCATCTTGCAGGAAGAGGTTCGTGCTCGTGTGACTGCTGACAGTTCTCTAGTTCAGACGGTCAACACCATGTACTCGGACTTCAATGGGAACATCGCAGCAATCCAACAAGAGAACATCGCACTGTCTACCAGGGTTAACTCCCTGGCTTCTTCGGTAACCACGATCAACGCCACCGTCAACGGGGACTCTGCCTCCGGTAAGGTTGGCTTGGTTGCAGAGGTTCAGACCCTGGACGGTAAGGTTACCCAGATCGGTGCTCGCTGGACTGCCACTGTTGATGTGAATGGTTTGGTCGGTGGCTTCGGTGTCTACAATGACGGTAACACTGTTGAAGCTGGCTTCAACGTAGACCGCTTCTGGATCGGCCGTCCTGGTACTCCGAAGAGTCCGGGAAGCTACCCGTTCATCATCGACAACAACATCGTCTACATCAAGGAAGCTGCCATCCAGAAGTTGACCTTCGACAAGCTCAGGGCACAGGATGGCAGCTTCATTGTTCAGAACGGGAAGATCCAGGCTGACTACATCGAAGCCAAGGATATCGTGGTGAACAATATCCAGTCGGACAACTACCAACCGGGAGTTCAAGGCTGGGCCTTCCGCCCCAACGGGATCATGGAAATCAACGGTACGGCTGGTACTGGCCGTATGACTATCAACAACGCCACCATCAAGGTGTTTGACCAAGCAGGCAAACTCCGGGTGCACATTGGGAACTTGCAAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
6de034233f8f4e664aad8fe201ff5dcb20ea40ecc464f128ca20f81c0c43dfb0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7811
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of bacteriophages infecting Pseudomonas aeruginosa Atef,A., El-Ganiny,A., Shaker,G. and Askoura,M. 2021-04-27 — GenBank