Protein

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Genbank accession
UMO76686.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MYPDYGYADGGNQDVYQPYAHGNPKHIDLADLDKITPADYGWTPDTLKAYMFGVSVVNPETGEPLGDKFYEHVIDTSIAKAEKKLDIAILPRLIQGEHHDFHQSDFNSYLYTHVFKRPLIQAEKLQLEINGRGIYRYPANWWKVYTLAGHIQMYPTAMMQTGTQFAYDFAFSGYPQLAGMPPSSGQVDAPQMIHIDYVAGMLPRKNRGYNAEWECPADLEQLVIKYAIKEIFQQWGRLIIGAGIAGKTLSIDGVSESIQTTQSAMYGGASADIKQIDEDIDKLERDLASYFGMNLGII
Physico‐chemical
properties
protein length:298 AA
molecular weight: 33479,46690 Da
isoelectric point:5,04778
aromaticity:0,12081
hydropathy:-0,33960

Domains

Domains [InterPro]
DC_0404
STR
7–298
DC_0404
Coil
Unmapped
266–286
Coil
UMO76686.1
1 298
Architecture
STR
STR 7-298
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage phiSHEF13
[NCBI] 		2918648 Uroviricota > Caudoviricetes > Herelleviridae > Schiekvirus > Schiekvirus Shef13
Host Enterococcus faecium E1071
[NCBI] 		535205 Bacillota > Bacilli > Lactobacillales > Enterococcaceae > Enterococcus > Enterococcus faecium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UMO76686.1 [NCBI]
Genbank nucleotide accession
OL799258.1 [NCBI]
CDS location
range 66547 -> 67443
strand -
CDS
ATGTACCCAGATTACGGTTATGCCGATGGTGGAAACCAAGATGTATACCAACCCTATGCACATGGCAACCCAAAACATATTGACCTTGCAGATTTAGATAAGATTACTCCTGCTGATTACGGTTGGACTCCTGATACGTTAAAAGCGTATATGTTTGGGGTATCTGTAGTTAACCCAGAAACTGGTGAACCGCTAGGAGATAAGTTCTATGAGCATGTAATTGATACATCAATTGCTAAAGCTGAAAAGAAATTGGATATTGCTATCTTACCCCGCTTGATTCAAGGAGAGCATCATGACTTTCATCAATCTGATTTTAATTCTTATTTATACACACATGTGTTTAAACGACCATTAATTCAAGCTGAAAAGTTACAATTAGAAATTAATGGACGAGGAATTTATCGTTATCCGGCAAACTGGTGGAAAGTATATACTCTAGCAGGGCATATTCAAATGTATCCAACAGCAATGATGCAGACAGGTACACAGTTTGCTTACGATTTTGCATTTTCTGGTTACCCACAATTAGCAGGTATGCCACCATCATCTGGTCAAGTAGATGCTCCACAGATGATTCATATTGACTACGTAGCAGGAATGTTACCTCGTAAGAATCGTGGATATAATGCAGAGTGGGAGTGTCCTGCTGATTTAGAGCAGTTAGTAATTAAATATGCTATCAAGGAAATCTTCCAACAATGGGGACGTTTGATTATTGGTGCCGGGATTGCAGGTAAAACATTATCTATTGATGGTGTTAGTGAAAGTATTCAAACTACCCAATCTGCTATGTATGGTGGTGCTTCTGCCGACATTAAACAAATTGACGAAGACATTGATAAACTAGAACGTGACTTAGCTTCTTACTTCGGAATGAATCTAGGAATTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c13ad582e774ec78a2ced16821d6c71222b1d011db1d6a660be1cbe8643cc8d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7475
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A diverse set of Enterococcus-infecting phage provides insight into phage host-range determinants Alrafaie,A.M., Pyrzanowska,K., Smith,E.M., Partridge,D.G., Rafferty,J., Mesnage,S., Shepherd,J. and Stafford,G.P. 2024 38960003 GenBank