Protein

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UniProt accession
Q1RNC4 [UniProt]
Protein name
Putative receptor binding protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MTIKNFTFFSPNGTDFPVGSNNDAKLYMMLTGMDYGTIRRKDWTSPLNTAFNVQYTNTSIIAGGRYFELLNETVALKGDSVNYIHANIDLTQTANPVSLSAETSDNSNRVDINNGSGVLKVCFDIVTTSGTGVISTKPTVQTSIFDSVNSNNISVNDISLKGSLDVPTQKWTLQTSNGLILQFTKKNNDLVIVQFSGEVTLTASGKIMGGTWVDFPYRPSVIQSLVGHLAGSGNSFHVDISPDGSITWWGPYVGYDPVTPRGNASYFIK
Physico‐chemical
properties
protein length:269 AA
molecular weight: 29194,35380 Da
isoelectric point:5,54307
aromaticity:0,10037
hydropathy:-0,14498

Domains

Domains [InterPro]
G3DSA:2.60.520.10
STR
1–140
G3DSA:2.60.520.10 G3DSA:2.60.40.1830
G3DSA:2.60.520.10
STR
1–135
G3DSA:2.60.520.10 IPR008982
SSF141658
STR
2–138
SSF141658 cd07964
IPR048780
RBD
2–138
IPR048780 IPR015027
IPR008982
RBD
175–269
IPR008982
Q1RNC4
1 269
Architecture
STR
RBD
STR 1-140 | RBD 166-269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
Q1RNC4
1 269
Domain Start End Length (AA) Confidence
N-terminal 1 157 157 0,9315
Central domain 158 258 102 0,0063
C-terminal 259 269 10 0,9973
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-157
Central
158-258
C-terminal
259-269

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage Q37
[NCBI] 		287439 Uroviricota > Caudoviricetes > Skunavirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAT81512.1 [NCBI]
Genbank nucleotide accession
AY576312 [NCBI]
CDS location
range 1 -> 810
strand +
CDS
ATGACAATTAAAAACTTCACATTTTTCAGTCCAAATGGGACAGACTTTCCAGTCGGTTCTAACAATGACGCAAAGTTATACATGATGTTGACTGGAATGGACTACGGAACGATTAGGCGCAAAGACTGGACAAGTCCGTTAAATACAGCTTTTAATGTACAATACACTAACACATCAATCATTGCAGGCGGGAGGTATTTTGAACTATTAAACGAAACTGTTGCCTTAAAAGGAGATTCAGTTAATTACATTCATGCAAATATTGACTTAACTCAAACCGCTAATCCTGTAAGTTTATCAGCAGAAACATCAGATAATAGTAACCGTGTTGATATAAACAACGGTTCTGGCGTTTTGAAAGTTTGTTTTGATATTGTTACGACTTCAGGAACTGGCGTAATAAGCACTAAACCGACTGTTCAGACTAGTATTTTTGATAGTGTCAATAGCAACAATATTTCTGTAAATGATATATCACTTAAAGGCTCACTCGATGTTCCAACTCAAAAGTGGACGCTTCAGACTTCAAATGGTTTGATATTGCAATTTACTAAAAAGAACAATGATTTAGTAATTGTCCAATTCTCTGGAGAGGTAACACTTACAGCAAGTGGTAAAATTATGGGGGGAACATGGGTAGATTTTCCGTACCGCCCTTCTGTTATTCAAAGTCTTGTTGGTCATCTTGCAGGGTCAGGTAACAGTTTCCATGTTGACATAAGCCCAGATGGTAGCATTACTTGGTGGGGTCCATACGTTGGTTATGACCCTGTGACACCACGTGGTAACGCAAGTTACTTTATAAAATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0007155 cell adhesion Biological Process IEA:InterPro (UniProt)
GO:0046718 symbiont entry into host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0019062 virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
32f3a6e4f62dab3952fec6f45b54eeabae3152125ed28da15edb85dd830466e6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7824
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50