Protein

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UniProt accession
A0A8S5RAG4 [UniProt]
Protein name
Choline binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,89
Protein sequence
MAEYLAKSEDLTAVADAIRAKGGTDAQLTFPGGFVGAVQAISAGTTITDGIVVTARDADGYATVVDFYGRQICIEQFGCQYEEADNPFLRLAKVNVKQAVTVIGPRAFNNNVSLQELTGVDFGAITSIGNKAFFNAQRVALGDVDLVSLAKYPEDGIFQNCGGITKLTVHADGNIHYNLCNKCSGLTDIVIDCSVAFTDGGTDSGYSALGRNTALVNCKIGNVGKPCKQTSLAMLSGCTNKNLVVEIYVAGENVDTAVSNIRNGATNATIIIKAAADTTYNGVAYAAGDTILTSTPEAST
Physico‐chemical
properties
protein length:300 AA
molecular weight: 31224,75000 Da
isoelectric point:4,71755
aromaticity:0,07000
hydropathy:0,11067

Domains

Domains [InterPro]
DC_1228
ATT
1–90
DC_1228 IPR026906
IPR032675
STR
74–286
IPR032675
A0A8S5RAG4
1 300
Architecture
ATT
STR
ATT 1-90 | STR 91-286 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5RAG4
1 300
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0827
Central domain 11 207 198 0,9603
C-terminal 208 300 92 0,4415
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-207
C-terminal
208-300

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctvxh7
[NCBI] 		2827283 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE27972.1 [NCBI]
Genbank nucleotide accession
BK015847 [NCBI]
CDS location
range 2697 -> 3599
strand -
CDS
ATGGCGGAATATCTTGCAAAATCAGAAGATCTGACCGCAGTCGCAGACGCCATCCGAGCCAAAGGCGGCACAGATGCGCAGCTTACGTTCCCGGGTGGTTTTGTAGGCGCGGTGCAGGCGATTTCTGCTGGCACCACCATCACGGATGGCATCGTCGTTACGGCGCGAGACGCGGACGGGTATGCCACGGTAGTGGACTTTTATGGGCGCCAAATTTGCATAGAGCAGTTTGGATGCCAGTATGAGGAGGCGGATAATCCTTTCCTCCGCCTTGCAAAAGTTAATGTAAAGCAGGCCGTAACAGTAATAGGACCGCGCGCGTTCAATAATAATGTCAGTTTGCAGGAGCTGACCGGGGTCGATTTTGGCGCAATCACGTCAATCGGCAATAAAGCGTTTTTCAATGCGCAGCGGGTGGCCCTCGGGGACGTTGACCTCGTGTCGCTCGCAAAATATCCAGAAGACGGCATTTTCCAGAATTGCGGTGGCATTACCAAACTGACGGTCCACGCGGATGGCAATATACACTACAATCTGTGCAACAAGTGCAGCGGCCTTACGGATATCGTTATCGATTGCAGTGTGGCTTTCACCGATGGTGGCACTGACAGCGGTTACTCCGCGCTCGGACGCAACACAGCGCTTGTCAACTGCAAAATCGGGAACGTCGGAAAACCGTGCAAGCAGACATCGCTTGCGATGCTTAGCGGTTGCACAAACAAAAATCTGGTCGTAGAAATCTACGTTGCTGGAGAGAATGTTGATACAGCTGTATCAAACATCCGTAATGGTGCTACCAATGCAACAATCATCATCAAGGCGGCCGCGGATACGACCTACAACGGCGTTGCCTATGCGGCTGGCGACACAATCCTGACATCGACACCGGAGGCGAGTACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
53c521660d42976fec08770e63816c10351cc4345ddcc6f3f0bb76969a5fbc9f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8846
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50