Protein

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Genbank accession
QEP52473.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSVDFTIKRDRSILSPFWPAIKIALAKVCDERIAELKNPTEEQIAELRKRYLNPTPTHNSIEPPVVKDGVTYSTITHRINGYARFDVEVHALPFKDLFMDLLPHTKTFTGLYECATVSDMIATAHFHKEKGDYFYVVETDKFYYFARKKLLGNDIYNFPVVTDIIFEKMSGFHFPTSTNPAEDPQRVIIEDSSIEGVGEIVLLSGDKLDEESEQSFLATFPEKVLFNEHDGKVVVDLVLNKKLDFDATRLVGKNLSWPGPALFTNDFVGNLTKVSDTAYTAELEFTLPYQMEALEPSSLVFEAEFSNEGGDKKATSNSTFVFEPTLDPLRFRNDSFIATKAGSFYFKDVGRVTLPQGFMFSLGDDEKITAIPDDWVLKGPFADVGAMTYVEKLGLHHIACRVTGCGNAELAMSFGQRTMVHPFIAGARMRDVSFDFAQTPATDMDPLFSAKLQLTVDHEINHDNFQGLNVTATANPNEPWVAPYEYISDVGSNEHHRIISNPLVRSYGSTERLVASHPGEWFELKAEFKDGEVVTNWVMDLYHQLSVIECRTDLELGDQNKLNLEALVHPNKLNEFYVPDWFFKEGYYNKSLIQVVKTGFVDTPFNNEGQDKVQMSRIVILDRNYVPGDDITITLPVGIIKDGLQYFNVVTVTLTPKVVYPDIACTYSSGERSLVFTPLIGIPYTDEHAIPVTFESVSAVLNNLEFIHEEIPYGQVTDRQSVSLKLRVIDENLPASLIRPVLNFKVRDKEVSIHDQWAHFYYQGLGETRLSQAVQVRKESSGTTSFVMLKKDLPSLLPSVVNLKMPLAGIVEARVEEGTMFAAFHTDVPHGDLWTEPMGDGTYVLEITYPGMDSPVKGNVLKGPPIPPYGKNPGFELASDPEVMEVVLSFQYLWMNDLATSPHDVYVLDLNGKAGRVLHSGPAIHSTAVENSITPIERPYQPLFVSPVGLSGWFIESGQVITHKPPLLTGWVHELAEGEWDHEYFQPWNVVYRNTETGEVVKNTAGNLIEIISYSVNGESNSPRVKFSQEGVRFTNPARVTPGEKVTVRAKFRAGTWEGEVKPTFVATITLTT
Physico‐chemical
properties
protein length:1073 AA
molecular weight: 120327,93080 Da
isoelectric point:5,04238
aromaticity:0,10718
hydropathy:-0,20121

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEP52473.1
1 1073
Domain Start End Length (AA) Confidence
N-terminal 1 438 438 0,7076
Central domain 439 637 200 0,3545
C-terminal 638 1073 435 0,1928
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-438
Central
439-637
C-terminal
638-1073

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage D9
[NCBI] 		2599404 No lineage information
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEP52473.1 [NCBI]
Genbank nucleotide accession
MN159079 [NCBI]
CDS location
range 252900 -> 256121
strand -
CDS
ATGTCTGTCGATTTCACTATTAAACGTGATCGGTCGATTCTCAGTCCCTTCTGGCCGGCGATCAAGATTGCGCTGGCTAAGGTGTGCGACGAGCGTATCGCCGAACTCAAAAACCCGACGGAAGAACAGATAGCGGAATTGCGCAAACGTTATCTGAATCCGACACCCACTCACAACAGTATCGAACCACCGGTGGTGAAAGATGGTGTGACCTACAGTACGATTACCCATCGTATCAATGGTTATGCTCGCTTTGACGTGGAAGTTCACGCCCTTCCCTTCAAAGACCTGTTCATGGATCTGCTACCCCACACTAAAACCTTCACAGGTTTGTATGAGTGTGCAACCGTTAGCGATATGATTGCTACAGCACATTTCCATAAAGAGAAGGGTGATTACTTCTACGTGGTGGAAACTGACAAGTTCTACTACTTCGCTCGTAAAAAGCTCCTCGGTAATGATATTTACAACTTCCCTGTTGTGACCGACATCATATTCGAGAAGATGAGTGGTTTCCACTTCCCTACTTCCACTAATCCCGCTGAAGATCCCCAGCGTGTTATTATCGAAGATAGTTCCATCGAGGGTGTGGGCGAAATCGTACTCTTGTCTGGTGATAAGCTGGATGAAGAAAGTGAACAATCATTCCTGGCCACGTTCCCTGAAAAAGTTCTTTTCAATGAGCATGATGGTAAAGTGGTCGTTGATTTGGTTCTGAACAAGAAGCTTGACTTCGACGCTACGAGACTGGTAGGTAAAAATCTGTCTTGGCCGGGACCGGCTCTTTTCACCAATGACTTCGTCGGTAATCTGACCAAAGTCAGCGATACCGCGTATACGGCCGAACTGGAGTTCACGCTCCCTTATCAAATGGAAGCCTTGGAACCTTCGTCCCTGGTATTCGAAGCCGAATTCTCCAATGAAGGAGGCGACAAGAAAGCAACTTCCAATTCCACGTTTGTCTTCGAACCCACCTTGGATCCGTTGCGTTTCCGTAATGATTCGTTCATCGCAACTAAAGCAGGGTCGTTCTACTTTAAAGATGTGGGTCGTGTAACTCTTCCTCAAGGGTTCATGTTCTCGCTGGGCGACGACGAAAAGATCACTGCGATTCCGGATGATTGGGTGCTTAAAGGACCGTTCGCAGATGTCGGTGCAATGACCTACGTGGAGAAGTTGGGTCTTCATCACATCGCTTGTCGAGTTACCGGTTGTGGCAATGCCGAACTCGCGATGTCATTTGGGCAACGGACCATGGTCCACCCGTTCATTGCTGGCGCACGGATGAGGGACGTCTCCTTCGATTTTGCCCAAACACCCGCAACTGATATGGATCCCCTGTTCTCAGCGAAACTTCAACTGACCGTTGATCATGAGATCAACCATGACAACTTCCAGGGTCTGAACGTTACAGCGACAGCTAATCCCAATGAACCTTGGGTGGCTCCGTATGAATATATTTCAGACGTCGGTAGTAACGAACATCATCGGATTATCTCTAATCCCTTGGTCCGTTCTTACGGCAGTACGGAACGTCTGGTAGCCTCGCATCCAGGTGAGTGGTTCGAACTGAAAGCCGAGTTCAAAGATGGGGAAGTCGTGACTAACTGGGTCATGGATCTCTATCACCAACTTTCTGTTATCGAATGTCGGACAGACCTTGAACTTGGTGACCAGAACAAACTCAATCTGGAAGCGCTTGTTCACCCCAACAAGCTCAATGAGTTCTACGTCCCCGATTGGTTCTTTAAAGAAGGGTATTACAACAAGAGTCTCATTCAAGTAGTGAAGACTGGGTTTGTCGACACACCCTTCAATAATGAAGGACAGGATAAAGTCCAAATGTCCAGAATCGTGATCCTGGACAGAAACTATGTTCCCGGTGACGATATCACCATCACACTCCCAGTGGGGATCATTAAGGACGGACTCCAGTATTTCAACGTTGTCACTGTCACTCTCACTCCTAAAGTGGTTTATCCCGACATCGCGTGCACTTATAGTTCCGGTGAACGTTCATTGGTATTTACACCGTTAATCGGTATTCCTTACACTGATGAACATGCCATTCCTGTCACTTTCGAAAGTGTAAGTGCTGTTCTCAATAACCTGGAATTTATCCATGAGGAAATACCTTATGGCCAGGTGACCGACCGACAGAGTGTCAGTTTGAAACTCCGGGTGATCGATGAAAATCTTCCGGCTTCGTTGATCCGACCTGTTCTGAACTTCAAAGTCCGAGACAAAGAAGTATCAATCCATGATCAGTGGGCTCACTTCTACTATCAAGGTTTGGGCGAAACTCGTCTTTCCCAAGCGGTTCAGGTCAGGAAAGAGTCCTCCGGGACAACAAGCTTCGTGATGTTGAAGAAAGATCTGCCCTCCTTACTTCCTAGTGTTGTCAACTTGAAAATGCCTTTGGCCGGGATTGTTGAGGCGAGGGTTGAGGAAGGAACGATGTTCGCAGCGTTCCACACAGATGTCCCTCATGGCGACCTGTGGACAGAACCCATGGGTGATGGGACCTATGTTCTGGAAATCACATACCCAGGCATGGATAGTCCCGTAAAGGGTAACGTTCTTAAAGGTCCTCCCATTCCTCCTTACGGGAAGAATCCTGGGTTTGAGCTGGCAAGCGATCCGGAGGTCATGGAGGTAGTTCTCAGTTTCCAATATCTCTGGATGAACGATTTGGCCACGAGTCCTCACGATGTGTATGTACTCGACCTTAACGGTAAGGCCGGTCGTGTTCTCCATAGCGGACCCGCAATCCACAGCACCGCAGTAGAGAATAGTATCACTCCGATCGAGCGTCCTTATCAGCCGCTGTTTGTGAGTCCGGTCGGTCTCTCTGGATGGTTCATCGAATCAGGTCAAGTGATTACACACAAACCTCCACTCTTGACTGGCTGGGTACATGAACTGGCTGAAGGCGAATGGGACCACGAATATTTCCAACCCTGGAATGTCGTGTATCGTAATACAGAAACCGGAGAGGTTGTCAAGAACACCGCCGGAAACTTGATCGAAATCATCAGTTACAGTGTAAATGGTGAGTCCAATAGCCCTCGGGTGAAATTCAGTCAAGAAGGTGTGCGGTTCACAAATCCTGCTAGGGTGACACCTGGTGAGAAGGTTACCGTTCGTGCCAAGTTCCGTGCAGGTACTTGGGAGGGTGAAGTTAAACCCACCTTCGTAGCAACGATCACACTGACTACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1b287f2be748b22a5ab7296a60ccb5959840c26d4c2a726cdfdd6a44bd3c3f0a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2778
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila bacteriophage D9 Rai,S., Tyagi,A., Naveen Kumar,B.T. and Singh,N. 2020-06-10 — GenBank