Protein

View in Explore
Genbank accession
ARQ95357.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MYGKFRSKGHFAAWMAHERRQQRRRDGGNVLPPSVIELLNARFVAEGDSITAGSNGPSWTWAFVSRTRGRFFLPTGYNQGTGGQTAAQMKTQIAAVTALSPKVVSLLAGTNDLSGTSNTPATIYADLKACWKGYIDGGADYVIAIKVLPRNDTAWNALSAARRNDRVILNGLIANLATDPELAGYASKIRIVDLESGINPETDMGDKLHPNWVGAIKLGNAIGDVANTLIVSATLNDLYLDSSNMLLAAKNPALNGTAGSRTGALNTGQVADGWKLDENGGMTVVASKTALNGANAQRVQVSGTNSTANRIVNFNAVVSGLTTAIGDKFEACVDFSLAAGATNLRNIVVNHSTASTPNGGNQTVTMDGAGAVSGTLRTTVSAPLGATVTTITLQCLMQFDAGTVAADITWGRPYLRKVPAIL
Physico‐chemical
properties
protein length:422 AA
molecular weight: 44196,42550 Da
isoelectric point:9,31531
aromaticity:0,06161
hydropathy:-0,04858

Domains

Domains [InterPro]
IPR036514
STR
14–233
IPR036514
IPR036514
STR
14–220
IPR036514 DC_0391
IPR051532
Unmapped
26–225
IPR051532
SSF52266
STR
41–223
SSF52266
IPR013830
ENZ
47–214
IPR013830
ARQ95357.1
1 422
Architecture
STR
RBD
STR 14-233 | RBD 234-420 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bradyrhizobium phage BDU-MI-1
[NCBI] 		1983459 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bradyrhizobium diazoefficiens
[NCBI] 		1355477 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARQ95357.1 [NCBI]
Genbank nucleotide accession
KY940711 [NCBI]
CDS location
range 82747 -> 84015
strand -
CDS
ATGTACGGCAAGTTCCGATCGAAGGGGCACTTCGCAGCGTGGATGGCGCACGAAAGGCGGCAGCAGCGGCGACGCGACGGCGGCAACGTTCTGCCGCCCAGCGTGATCGAGCTGCTCAATGCTCGCTTCGTCGCCGAGGGTGACAGCATCACGGCAGGGTCCAACGGTCCGTCCTGGACCTGGGCCTTTGTGTCCCGCACGCGCGGCCGGTTCTTCCTGCCCACTGGCTACAACCAGGGCACGGGCGGCCAGACGGCTGCCCAGATGAAGACCCAGATCGCCGCAGTCACTGCGCTGAGCCCGAAGGTGGTCTCGCTGCTCGCGGGCACTAATGACCTGTCCGGCACCTCTAACACGCCGGCCACGATCTACGCCGACCTGAAGGCCTGCTGGAAGGGATACATCGATGGCGGCGCGGACTACGTCATCGCCATTAAGGTGCTGCCTCGGAACGACACGGCCTGGAACGCTCTTTCGGCCGCGCGCCGGAATGACCGCGTCATCCTGAACGGTCTGATCGCGAACCTGGCGACCGATCCCGAGTTGGCCGGCTACGCCTCGAAGATCCGCATCGTGGATCTGGAGAGCGGGATCAATCCGGAAACGGACATGGGCGACAAGCTGCACCCGAACTGGGTCGGAGCCATCAAGCTCGGCAACGCGATCGGCGACGTGGCCAACACGCTCATCGTCTCGGCGACGCTGAATGACCTCTACCTCGACAGCAGCAACATGCTGTTGGCGGCAAAGAACCCCGCGCTGAATGGTACGGCCGGCAGCAGGACCGGCGCCCTGAATACCGGGCAGGTGGCTGACGGTTGGAAGCTGGACGAGAACGGCGGCATGACCGTCGTTGCATCCAAGACCGCGCTCAACGGCGCAAACGCCCAGCGGGTTCAGGTCTCTGGCACGAACAGCACGGCGAACCGCATCGTCAACTTCAACGCCGTTGTGAGCGGTCTCACCACCGCAATTGGCGACAAGTTCGAAGCCTGCGTCGACTTCAGCTTGGCTGCAGGCGCGACCAACCTGCGGAACATCGTCGTCAACCACTCGACTGCATCGACGCCGAACGGCGGCAACCAGACCGTCACGATGGACGGAGCAGGGGCCGTCAGCGGCACGCTTCGAACCACAGTGTCGGCTCCGCTCGGGGCGACCGTAACCACCATCACGTTGCAGTGCCTGATGCAGTTCGATGCAGGCACGGTTGCGGCGGACATCACCTGGGGTCGCCCCTACCTGCGAAAGGTGCCGGCGATCCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7afe109decfd1feb20082cd078ca4424848997f33d3add35e1931e3253c99b67
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8633
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel bacteriophage infecting Bradyrhizobium diazoefficiens USDA110T Liu,J., Yu,H., Huang,Y., Yu,Z., Fan,G., Jin,J., Liu,X. and Wang,G. 2017-07-27 — GenBank