Protein

View in Explore
Genbank accession
XHY53480.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTEQIDNIVLREALKKMFSVGTHSLQFTKKDGTVRDMIATRDPALMPFETYEKWLVPNVDKPRKESETSLPVYEIAVEGFRSFGLDSLIHVNGLTPAQIIEIYK
Physico‐chemical
properties
protein length:104 AA
molecular weight: 11885,58850 Da
isoelectric point:5,65323
aromaticity:0,08654
hydropathy:-0,25000

Domains

Domains [InterPro]
IPR024401
STR
12–89
IPR024401
XHY53480.1
1 104
Architecture
STR
STR 12-89 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SFHK24
[NCBI] 		3350103 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella flexneri 2a
[NCBI] 		42897 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Shigella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHY53480.1 [NCBI]
Genbank nucleotide accession
PQ351812.1 [NCBI]
CDS location
range 133375 -> 133689
strand +
CDS
ATGACTGAACAAATTGATAATATCGTACTTCGTGAAGCACTCAAGAAAATGTTTTCGGTCGGTACTCACTCTTTGCAGTTTACTAAGAAAGATGGTACTGTCCGAGATATGATCGCCACGCGAGATCCGGCACTGATGCCATTTGAAACATACGAAAAGTGGTTAGTGCCTAATGTTGATAAACCGCGTAAAGAATCAGAAACATCTTTGCCAGTATATGAAATTGCAGTTGAAGGTTTTCGTAGCTTCGGGCTTGATAGTCTGATTCATGTAAACGGCTTAACGCCAGCGCAGATCATCGAAATTTATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
81bdfa98d5b64edb7043dbf88e26b64edd3931d167e007dee6464e625bde65ce
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8598
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50