Protein

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Genbank accession
QFP93145.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,78
Protein sequence
MLESMLAGKQVDKNVLIDIDFSRQDIGDTFMTDLAGNQWDLVGNDPDCKVVSDSVKGKAFRFKGTTYFRSPLVSRLLLANVSFSLELGIHSDASASGVILGTGNYPSSGGILGGFNLSTGQYPATYIQMFMTNSSGVYQRCLPANTAWANTWDDIIFTRRRNTSVFGQVTRNGVITGTNSVGDNPFGNGKDYFCIGANAHILGTSGFKGLISRIKLKLLT
Physico‐chemical
properties
protein length:220 AA
molecular weight: 23759,65780 Da
isoelectric point:8,77358
aromaticity:0,10000
hydropathy:-0,05682

Domains

Domains [InterPro]
IPR013320
STR
54–215
IPR013320
QFP93145.1
1 220
Architecture
STR
STR 54-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QFP93145.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,2539
Central domain 43 209 168 0,1027
C-terminal 210 220 10 0,9790
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage PCH45
[NCBI] 		2608368 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFP93145.1 [NCBI]
Genbank nucleotide accession
MN334766 [NCBI]
CDS location
range 34531 -> 35193
strand +
CDS
ATGCTTGAGAGTATGTTAGCTGGAAAGCAGGTCGATAAGAATGTCCTTATCGATATTGATTTCTCCAGACAAGATATCGGCGATACCTTCATGACAGATCTTGCAGGTAACCAGTGGGACCTTGTAGGAAATGATCCGGACTGTAAAGTAGTCTCGGATAGTGTGAAAGGTAAAGCATTCAGATTTAAGGGAACAACTTATTTTAGGAGTCCCTTGGTTAGCAGGCTGCTACTTGCTAACGTTAGCTTCTCATTAGAGTTAGGCATTCACTCAGATGCATCGGCCTCTGGTGTTATTCTAGGGACAGGTAACTATCCTTCTTCCGGGGGCATCTTAGGCGGGTTTAACTTATCTACAGGTCAATACCCTGCCACCTACATTCAAATGTTCATGACTAACTCTAGCGGTGTTTATCAACGCTGTTTACCAGCTAACACTGCATGGGCCAATACGTGGGACGACATCATCTTTACTCGTCGACGTAACACCAGTGTATTTGGGCAGGTTACTCGTAACGGTGTTATTACCGGAACTAACTCCGTAGGGGATAATCCATTCGGTAACGGTAAAGATTATTTCTGTATTGGGGCTAATGCGCATATACTCGGAACATCTGGATTCAAAGGTTTAATCAGTAGAATCAAACTTAAGTTACTAACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
520e988722c7d3fc8889f8509889b249ee53d875369416e5a96bbaee7c15ba58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8245
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Type III-A CRISPR-Cas RNA targeting inhibits a nucleus forming jumbophage Malone,L.M. and Fineran,P.C. 2019-09-25 — GenBank