Protein

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Genbank accession
AUR87843.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MATPGGLVDKQELIDAQLDTAHLGRVVNSKDASGAPINTSTNRTGGVNKTLDALEAEYLEAIRNAGGEPLNGGVWAAGQTFTAYNQFMVYNDIAYKPRTTTTLPYGPTGVAPDTNFVGPFSELSITNLGTYVDYSFDTVVELQAAEYMSIGDKASITNRGRGVFVKETGGSPNGFDVIALNDGNTARLVTRPASSGNIGLFPSGSDQSDALIALSGINSGSSFLSPGNYVFNSGDFAGVPFHSDGSVTTTNPSVAVVDVSIGKNAKFNKAPSYDRDAGKPLTLSSDENLGGIRRVSYKLPDQVMGDASPSVNLRLANGVVIPKFRVKADISGDNFAVRINTQTQSTRDTSVAEVLNTGEISTPTAGFIGRSQNYVEMTKGVGAGVVKISYQYQDPLTKVRSNVPVWVIDLDDGKAPYFYKFLFPECSGSTMNGFKKLSNAPALSWIIEAVEGPVSITAKGKNLSDSIKDTVFLRTVSPADESGKFISPYYTGFDINFIEVIISQNSPGSSFTLTNLEIEVE
Physico‐chemical
properties
protein length:521 AA
molecular weight: 55329,03970 Da
isoelectric point:4,89125
aromaticity:0,08829
hydropathy:-0,17601

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.104.O._10N.286.49.A12
[NCBI] 		1881324 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87843.1 [NCBI]
Genbank nucleotide accession
MG592476.1 [NCBI]
CDS location
range 59426 -> 60990
strand +
CDS
ATGGCCACACCTGGCGGACTCGTCGACAAGCAAGAACTAATCGACGCACAACTCGACACGGCGCACTTAGGTCGTGTCGTCAATTCTAAGGACGCTTCGGGCGCACCTATCAACACGTCTACGAACCGTACAGGCGGAGTGAATAAAACACTCGACGCGCTTGAGGCGGAGTACCTTGAAGCTATACGCAATGCGGGCGGTGAACCGTTAAACGGGGGCGTATGGGCCGCAGGTCAAACTTTTACCGCGTATAATCAGTTTATGGTGTACAACGATATAGCGTATAAACCCCGGACGACCACGACGTTGCCCTACGGTCCCACAGGCGTCGCACCTGACACGAATTTTGTGGGTCCTTTTTCAGAGTTGTCGATAACTAACCTCGGTACGTACGTAGATTATTCCTTCGATACCGTTGTTGAATTGCAAGCCGCCGAATACATGTCAATAGGTGATAAGGCTTCAATTACCAATAGGGGTCGCGGTGTTTTTGTTAAAGAAACGGGAGGTTCGCCCAATGGTTTTGACGTGATAGCGCTTAATGACGGTAATACCGCTAGACTTGTAACAAGACCCGCGTCATCAGGTAACATCGGGCTATTCCCATCAGGTTCCGATCAGTCAGACGCTTTAATCGCTCTTTCAGGAATTAACTCGGGATCTTCATTTTTATCTCCGGGTAACTATGTTTTTAATTCAGGGGATTTTGCCGGGGTTCCATTCCATTCAGACGGGTCGGTTACGACCACTAACCCCTCGGTTGCAGTGGTTGACGTGTCGATAGGTAAGAATGCTAAATTCAACAAAGCCCCGTCTTATGACCGTGACGCAGGTAAGCCGCTAACTTTATCGTCAGACGAGAATCTCGGTGGGATAAGAAGAGTTTCATACAAGCTACCAGACCAAGTAATGGGAGACGCCAGCCCCTCCGTGAATCTAAGGCTCGCAAATGGGGTAGTTATACCTAAATTCAGGGTTAAAGCTGATATATCTGGCGACAACTTTGCTGTAAGAATAAACACACAAACCCAAAGTACGAGGGACACTTCGGTTGCTGAAGTTTTAAATACCGGCGAGATTTCCACACCTACAGCCGGATTTATAGGTAGGTCTCAGAACTACGTAGAAATGACAAAAGGCGTAGGTGCGGGGGTTGTTAAAATCTCATACCAGTATCAAGACCCATTAACCAAGGTTAGGAGTAACGTACCGGTTTGGGTTATTGATTTAGATGATGGGAAAGCCCCCTATTTTTACAAATTCCTATTTCCAGAGTGCTCCGGCTCTACAATGAACGGGTTCAAGAAATTATCCAACGCTCCAGCCCTTAGTTGGATAATTGAGGCGGTTGAGGGCCCTGTTAGTATAACTGCAAAGGGTAAAAACCTTTCAGATAGTATTAAGGATACAGTGTTCCTACGCACTGTATCACCTGCGGATGAATCGGGTAAATTTATAAGTCCTTACTATACTGGATTTGATATTAATTTTATTGAGGTGATAATATCTCAGAACTCTCCCGGTTCGTCCTTTACTTTAACTAACCTAGAGATAGAGGTTGAATT

Genome Context

Genome Context

Tertiary structure

PDB ID
a3a4c9db4945b2717cef28607493dd73bf4125fdd7a467e67105e938b779b98a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5548
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank