Protein

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Genbank accession
YP_009799119.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MALNIRTVMTYPLDGSNVNFTITFEYLARKFITVTLLGTDRKELVLNQDYRFTSKNQITLTKAWGPSDGYENIEIRRFTSATERLVDFADGSILRAYDLNISQVQTLHVAEEARDLTADTIGVNNDGNLDARGRRIVNLADGVDAGDAVTVRQQKNWADSALNQANRSKQEADRSEAAANRSGASAAAALAYEQKAKTSENNSKVSEGNAKTSETNSKDSENSARASANAAKVSEGNAKTSEANSKASEERAILEVGKLGNINDFAASIKSVTGNDVVMKGKFSADNGLQSNAGISYLNVNTATLTALRTQGDIEVFPPIGGQPNGEGGQIRLKGAAGDNTGGFLDVDSVGALRIVKDGQGQGLKMSFDTGGNTYVYTKLYTASGVYLKHDGSTVIGPDGNIGSSIYRGGSIHNDLNQRATQGDNMINNAITAWSGDLSGVGQWDINMPFSINGRLLGFRVFKDGRIQWISIQLGPWSDQEYGVAGTGDLXIRFQQINGGTALRIYNIRNATLQEIQIWR
Physico‐chemical
properties
protein length:520 AA
molecular weight: 55822,09230 Da
isoelectric point:5,68625
aromaticity:0,06936
hydropathy:-0,44412

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0657
STR
1–515
DC_0657
YP_009799119.1
1 520
Architecture
ATT
STR
ATT 1-131 | STR 132-515 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009799119.1
1 520
Domain Start End Length (AA) Confidence
N-terminal 1 268 268 0,9485
Central domain 269 467 200 0,5127
C-terminal 468 520 52 0,9811
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-268
Central
269-467
C-terminal
468-520

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage fPS-59
[NCBI] 		2052754 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009799119.1 [NCBI]
Genbank nucleotide accession
NC_047935.1 [NCBI]
CDS location
range 32298 -> 33860
strand +
CDS
ATGGCTCTAAATATTCGTACCGTAATGACTTACCCACTGGATGGCTCAAACGTGAACTTTACGATTACCTTTGAGTATCTGGCCCGTAAGTTCATTACTGTGACTCTGCTTGGTACTGACCGTAAAGAGTTAGTTCTCAATCAGGACTACCGGTTCACCTCTAAGAATCAAATCACTCTAACTAAGGCGTGGGGTCCAAGTGATGGCTATGAGAACATCGAGATTAGACGATTCACCTCGGCTACTGAGCGTCTTGTTGACTTTGCTGATGGCTCAATCCTACGTGCTTACGACTTGAATATCTCACAGGTTCAGACACTGCACGTTGCAGAAGAAGCACGTGACCTAACGGCTGATACTATCGGTGTTAATAACGACGGTAACTTAGATGCTCGTGGTCGCCGGATTGTTAACTTGGCTGATGGTGTAGACGCTGGGGATGCTGTCACAGTTCGACAACAGAAAAACTGGGCTGACTCTGCATTGAACCAAGCGAACCGCTCTAAGCAAGAAGCTGACAGGTCTGAGGCCGCTGCGAACCGTAGTGGTGCATCTGCCGCTGCCGCTCTTGCGTATGAACAGAAAGCTAAAACCAGTGAGAACAACTCTAAGGTATCTGAGGGCAACGCCAAGACCTCTGAGACCAACTCTAAGGATTCTGAGAATTCAGCTCGTGCGTCTGCCAATGCTGCTAAGGTATCTGAGGGTAACGCCAAGACCTCTGAGGCCAACTCTAAGGCAAGTGAAGAACGTGCTATTCTTGAGGTTGGTAAGCTGGGTAACATTAATGACTTTGCTGCCTCTATCAAGAGTGTTACAGGTAATGATGTTGTCATGAAAGGTAAGTTCTCTGCTGATAATGGACTTCAATCCAATGCTGGTATCTCATACCTTAATGTAAACACAGCGACCTTAACAGCTTTACGCACACAAGGCGATATCGAGGTGTTCCCTCCTATCGGTGGTCAACCTAATGGTGAAGGTGGACAGATTCGTCTTAAAGGTGCTGCTGGTGATAATACTGGAGGTTTTCTTGATGTAGATTCCGTAGGCGCATTACGTATCGTTAAGGACGGGCAAGGCCAAGGCTTGAAGATGTCTTTTGATACCGGTGGTAATACCTACGTCTACACTAAGCTATATACAGCAAGTGGCGTCTACTTGAAGCACGATGGCTCCACTGTTATTGGACCTGATGGCAACATTGGTAGCTCTATTTATCGGGGAGGTTCCATCCATAACGACCTCAACCAGAGAGCAACTCAAGGGGATAACATGATTAACAATGCGATCACTGCGTGGTCTGGTGATCTTTCAGGTGTTGGTCAGTGGGATATTAATATGCCTTTTAGCATCAACGGGAGGCTACTTGGGTTCCGTGTTTTCAAAGATGGGCGCATCCAATGGATATCTATCCAACTGGGGCCGTGGAGTGACCAAGAGTATGGTGTTGCAGGTACTGGCGACTTAGRTATTAGGTTCCAGCAAATCAACGGTGGTACTGCTCTACGTATCTACAACATCCGTAACGCAACCTTACAGGAAATCCAAATCTGGAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2d8d857cb3951f549806775963c90b915a3bce85eabe30a128d03ad00236d88d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8173
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50