Protein

View in Explore
Genbank accession
XDQ99018.1 [GenBank]
Protein name
L-shaped tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADLAKIQFLRSTVAGKTPTTSQLADGELAINMADYAIYTKNGSSIVQLAGKGIPETNTKKLTVNGPSALNDTVTVAEGKTITFTNADLSGGMVRHITGKNALNDGWYIGSGGESNKGFLEIGTIDDGDEEIRFVSRGSGDTVRRTLKLIDSGGNTRVPGNIYIDEAMGGGGSAFISKNKAYFGAGGADIYMRNTAGGATNQLTITDGGELLFQAKPVYWDGRKPTLTELGIGRVENARQLEQDNFPVITGNDNRWIKVALLKDPGSGQSRLQLMVTNGGNYGSTRSSIDFIDCSARSIPSTLTSSNIRSYLQIRRLGDPAFDNTNQMRYSLVRTSEGLELWFTQRAFIGGVKVALLSIAGGAATEYYLPTGYTTSATAPEGLVESVAIRIYDEMNKPNLDDGTDGILSVAKGGTGASTASAARTNLGLGTAATRDVGTGSGQVMLVGAYGLGGKGTSYTVSNARDYLKQLRTDGSQFMRNTLGTEINYGMGASFYSSVSDVHAVISVDWNTGRVKVGATNDANLNSDTGKISSQELYGTAFKPTPDDVGAVARTGDGMTGDLSITKVSPGFHLNAESGNSVIWFKYKGVESGAVWSLPNTASSGEVRIRARTSGGTTGGEFSFKSDGTFTSPGDVNITSGAFNGKSVNTQYANFNNTSSTTTEQTVSISGSQHTPLLLNRPTNSNLSIGFKLSGMNMKRLGIDVNGDIRYGEAENQTQNAWLLTSDTINRWTVNFGRDINVAGVVNSTGGFTGPVTAYDLTGVTQDLDALTLNYTEPGHVKVYSCRSMGGGDNITNKPSGVGGNFIVIVECLRKVSGTDYTNRQVLRASDNSRSWERWLTVSGTTKAWTPWRMNVVSGNDDDVSFKSVTTTTGNLNSGNDLIVANNARVGGNLGLGGASSTKYADKGVVIGKGSALLETTDGRVIIGSSGGGNAVELRPGGPTQTNNRIKVTATSGSGGDTAIEYEQGAKIRSNNGGALIISAKAGQSIYLRPQGDASSTNETRIDANGSITINGNINANGTLTCTGGAVNGDLTVSGKVDITGNQLKTTSLWVTGNSALNGNLEVGGNVVSNTGIGSFVGAVDVKAPAVDNGTTHLWFRHSNGGERGVIYMPGNNNTMMGLRAGGSEWQLDGPTGQMIGPGARWRIHADGNLQGDVYGGYITNYINDRFNQCAQWVRTGAQQDFGPIGRPAPGKTVPGGWVLVGLNGNSNETNQNMQLIGGRLQVWKPGVQWVDSAT
Physico‐chemical
properties
protein length:1239 AA
molecular weight: 130075,69840 Da
isoelectric point:7,09597
aromaticity:0,06941
hydropathy:-0,32922

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDQ99018.1
1 1239
Domain Start End Length (AA) Confidence
N-terminal 1 362 362 0,0716
Central domain 363 561 200 0,2497
C-terminal 562 1239 677 0,6364
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-362
Central
363-561
C-terminal
562-1239

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KM5a1-KLB3
[NCBI] 		3129266 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella sp. M5a1
[NCBI] 		2759708 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Klebsiella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDQ99018.1 [NCBI]
Genbank nucleotide accession
PP444687.1 [NCBI]
CDS location
range 4410 -> 8129
strand -
CDS
ATGGCTGATTTAGCAAAAATTCAATTCCTACGTAGCACAGTTGCGGGGAAAACACCTACTACAAGTCAGCTTGCAGATGGTGAACTGGCGATCAACATGGCTGATTATGCCATTTACACGAAAAATGGTTCTTCGATCGTTCAGTTAGCGGGTAAAGGTATCCCAGAAACAAATACCAAAAAATTAACAGTAAATGGGCCTAGTGCTCTTAATGATACCGTTACCGTAGCGGAAGGTAAAACTATTACTTTCACCAACGCGGATTTGAGCGGGGGTATGGTTCGTCATATCACTGGTAAAAACGCGCTTAATGATGGTTGGTACATCGGTTCTGGTGGTGAGAGCAATAAAGGGTTTTTAGAAATCGGTACAATTGATGACGGTGATGAAGAGATCCGTTTCGTTTCCCGTGGTTCTGGTGATACTGTTCGTCGTACTCTGAAACTTATTGATTCCGGTGGTAACACTCGCGTACCAGGTAACATCTATATTGATGAAGCTATGGGCGGTGGCGGTTCTGCTTTTATTTCAAAAAACAAAGCATATTTCGGTGCTGGCGGTGCTGATATCTATATGCGTAACACTGCTGGCGGTGCGACAAATCAGTTAACGATCACTGATGGTGGTGAATTGCTGTTTCAAGCAAAACCTGTATACTGGGACGGTCGTAAACCGACTTTAACCGAATTGGGGATCGGGCGGGTTGAAAACGCACGTCAGCTTGAACAAGATAATTTCCCTGTAATCACGGGGAATGATAATCGTTGGATTAAAGTTGCTCTGTTAAAAGATCCGGGTTCCGGTCAGAGTCGCTTGCAACTGATGGTGACTAACGGCGGTAACTATGGTTCTACGCGTAGTTCTATCGACTTTATCGATTGTAGTGCTCGAAGCATTCCATCGACATTAACAAGCAGTAACATACGTTCTTATCTGCAAATTCGTCGTTTAGGGGATCCAGCATTTGATAATACTAACCAGATGCGTTATAGCCTTGTTCGTACCTCCGAAGGTTTAGAACTGTGGTTTACTCAACGCGCGTTTATTGGTGGTGTTAAAGTTGCGCTGTTGTCTATCGCTGGCGGTGCTGCTACTGAATATTATCTGCCTACTGGTTACACGACTTCTGCAACTGCTCCGGAAGGGTTAGTTGAGAGCGTGGCTATTCGTATCTATGACGAAATGAACAAGCCTAACCTTGACGATGGTACTGATGGTATTCTGTCTGTTGCTAAAGGTGGTACAGGCGCAAGTACAGCCTCTGCTGCTCGCACAAACTTAGGTTTGGGTACGGCTGCAACCCGTGATGTTGGTACAGGTTCCGGACAAGTAATGCTTGTTGGTGCTTACGGTTTAGGCGGTAAGGGTACATCATACACCGTTTCTAACGCTCGCGACTATCTGAAACAACTGCGTACTGATGGTTCTCAGTTCATGCGAAATACGCTTGGTACTGAAATTAACTATGGTATGGGCGCAAGTTTTTATAGCTCTGTATCAGATGTTCATGCGGTGATCTCGGTTGATTGGAATACTGGACGCGTTAAAGTTGGTGCAACTAATGATGCTAACTTAAACTCAGATACCGGAAAAATCAGCTCTCAGGAACTGTACGGTACTGCATTTAAACCAACTCCGGATGACGTAGGGGCTGTTGCTCGTACTGGTGATGGTATGACAGGTGATCTGTCTATTACCAAAGTGTCTCCCGGATTCCATTTAAATGCTGAGAGCGGAAACTCCGTAATTTGGTTTAAGTATAAAGGGGTTGAAAGTGGTGCTGTGTGGTCGTTGCCTAATACTGCCTCTTCTGGTGAAGTTCGCATTCGTGCCAGAACGTCGGGTGGAACGACAGGTGGAGAATTCTCGTTTAAATCTGACGGTACGTTTACATCACCAGGTGATGTAAATATCACTAGCGGCGCTTTCAACGGTAAAAGTGTCAATACTCAGTATGCGAACTTTAATAACACAAGTTCAACAACAACCGAACAAACCGTTTCTATTAGTGGTTCGCAGCACACTCCGCTGTTACTGAATAGACCGACTAACTCAAACTTGTCTATCGGGTTTAAACTTTCCGGAATGAACATGAAACGTTTGGGTATCGATGTAAACGGCGATATTCGTTACGGTGAAGCCGAAAACCAGACACAAAACGCATGGCTGTTGACTTCGGATACGATAAACAGATGGACTGTTAACTTCGGTCGTGATATTAACGTTGCTGGTGTGGTTAATTCAACTGGTGGATTTACTGGCCCTGTTACTGCATATGATTTGACTGGGGTAACTCAGGATCTTGACGCTTTAACGTTGAATTATACCGAACCAGGTCATGTTAAAGTTTATTCGTGCCGTAGCATGGGTGGCGGTGATAACATCACCAATAAACCTTCTGGCGTCGGTGGTAACTTTATTGTTATCGTTGAATGTCTCCGTAAAGTGAGCGGTACTGATTACACTAACCGTCAAGTATTACGCGCATCGGACAATAGCCGCAGTTGGGAACGTTGGTTAACTGTTAGCGGTACTACTAAAGCATGGACACCGTGGAGAATGAACGTTGTTAGCGGAAACGATGATGATGTATCATTTAAATCTGTTACCACGACTACAGGAAACCTGAACAGCGGAAATGATCTGATTGTTGCTAACAACGCTCGCGTAGGTGGTAACTTAGGGTTAGGTGGTGCTTCTTCCACGAAATACGCTGATAAAGGTGTTGTGATTGGCAAAGGTAGTGCTCTGTTAGAAACTACTGATGGTCGTGTGATTATTGGTAGTTCTGGTGGTGGTAATGCTGTTGAATTGCGTCCTGGTGGCCCAACTCAAACCAACAACAGGATCAAAGTAACTGCTACCTCTGGAAGTGGTGGTGATACTGCGATCGAGTATGAACAAGGGGCGAAAATTCGTTCTAATAACGGCGGCGCGTTGATTATTTCTGCTAAAGCAGGTCAATCAATCTATCTACGACCGCAAGGTGATGCATCCAGCACAAACGAAACCCGTATTGATGCAAACGGTAGTATCACGATTAACGGCAATATTAACGCCAACGGTACATTAACTTGTACTGGTGGTGCTGTTAACGGAGACTTGACTGTATCAGGAAAAGTAGATATCACTGGAAACCAGTTAAAAACCACATCGCTCTGGGTTACTGGAAATTCGGCACTTAACGGTAATTTAGAAGTAGGCGGTAATGTTGTTAGTAATACTGGTATTGGTAGTTTTGTTGGTGCTGTAGATGTTAAGGCCCCTGCCGTAGATAATGGTACAACGCACCTTTGGTTCCGACATTCTAATGGTGGCGAGCGTGGTGTGATTTACATGCCAGGTAACAATAATACCATGATGGGATTAAGAGCTGGCGGTAGTGAGTGGCAATTGGATGGTCCGACAGGTCAAATGATAGGCCCAGGTGCTCGTTGGCGTATTCATGCAGATGGTAACCTACAGGGTGATGTTTACGGTGGTTATATCACTAACTATATCAACGATAGGTTTAACCAATGTGCACAGTGGGTTCGTACTGGTGCTCAACAAGACTTTGGTCCAATTGGTCGTCCAGCACCTGGTAAAACTGTTCCTGGTGGTTGGGTGCTTGTTGGTCTTAACGGTAACAGCAACGAAACTAACCAGAACATGCAACTTATCGGCGGACGGTTACAAGTATGGAAACCGGGCGTTCAATGGGTTGATTCTGCTACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9558385a342d4e3cfe9b9e2c19e864756ba5f980f80278aeb7f6f440254f7942
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5278
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of 24 phages infecting the plant-growth-promoting rhizobacterium Klebsiella sp. M5a1 Gittrich,M.R., Sanderson,C.M. and Sullivan,M.B. 2025-02-21 — GenBank