Protein

View in Explore
Genbank accession
XLM30724.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAVGDGNGNPVTPDPEQTQLVRERFRATINRVFQSPTDPLRFTAELVIPASVGGFTLREVGVFDADGSLFAVGNLPNTYKPVDTEGSYSDTVVRLDFLVSNASTITLQVDPNVVVVTQQWISNNVTAGTIIPGGTTGQVLTKKSNADGDVHWSDPTSALVVVDTVAEKQTLAAGQTIVDLTETITYGLAVYIEGVRLPMGSGADEWHPDPNITTRVILGKSYPDGSIFQGVNNEPAGSAPAPLERSKNLSDVASVETSRTNLDVFSKAETRQMAPAGLVATFARSTAPTGWLKANGAAVSRTAYADLYAAIGTRFGAGDGINTFNLPDLRGEFIRGWDDGRGVDSGRALGSAQGQLIESHDHGMDPYKPINANVLKPVASGAELSSVGVGNTVRTRPTGGSETRPRNVALLYCIKF
Physico‐chemical
properties
protein length:416 AA
molecular weight: 43948,54170 Da
isoelectric point:5,00811
aromaticity:0,06731
hydropathy:-0,16899

Domains

Domains [InterPro]
IPR051934
Unmapped
1–122
IPR051934 IPR037053
IPR022225
ATT
1–119
IPR022225 SSF88874
DC_0386
STR
1–344
DC_0386
IPR011083
ATT
277–334
IPR011083
DC_1811
STR
319–416
DC_1811
XLM30724.1
1 416
Architecture
ATT
STR
ATT
STR
ATT 1-119 | STR 120-263 | ATT 264-334 | STR 335-416
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Alux-21
[NCBI] 		3383217 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLM30724.1 [NCBI]
Genbank nucleotide accession
PQ589898 [NCBI]
CDS location
range 28851 -> 30101
strand +
CDS
ATGGCAGTTGGCGATGGCAACGGCAACCCGGTGACACCTGACCCGGAACAAACGCAGTTGGTGCGCGAGCGTTTCCGCGCCACCATTAACCGTGTTTTCCAGTCACCTACTGACCCGTTAAGGTTCACCGCAGAGTTAGTCATTCCCGCCAGTGTTGGCGGGTTTACCCTGCGTGAAGTTGGCGTGTTTGATGCTGATGGTTCGCTGTTTGCAGTTGGCAACCTGCCAAATACTTACAAGCCTGTTGATACCGAAGGTTCTTACTCTGACACGGTGGTGCGACTTGATTTCCTGGTCAGTAACGCCAGCACAATTACGCTACAGGTTGACCCAAACGTTGTGGTAGTGACGCAACAATGGATTTCAAACAACGTGACCGCTGGAACAATCATACCTGGCGGAACCACCGGACAGGTACTGACGAAGAAATCCAACGCTGACGGCGATGTGCACTGGTCAGACCCGACCTCAGCGCTTGTGGTGGTTGATACGGTTGCAGAGAAACAAACGCTGGCAGCAGGGCAAACTATCGTTGACCTGACAGAAACCATTACCTACGGCCTGGCGGTTTACATTGAAGGTGTTCGCCTTCCGATGGGTTCCGGTGCGGATGAATGGCATCCTGACCCCAACATCACAACCAGAGTCATTCTTGGGAAATCATATCCAGATGGTTCTATATTCCAGGGCGTGAACAACGAACCAGCAGGCAGCGCACCTGCACCGCTGGAACGCTCAAAAAACCTGTCTGACGTTGCCAGCGTGGAGACATCGCGCACCAATCTTGACGTGTTCAGCAAGGCAGAAACGCGGCAGATGGCACCGGCTGGGCTTGTTGCTACGTTTGCAAGAAGCACAGCGCCAACAGGCTGGCTGAAAGCGAATGGCGCCGCCGTAAGCCGTACCGCATACGCTGACCTGTACGCGGCCATTGGCACGAGATTTGGCGCTGGTGATGGCATCAACACGTTCAACCTTCCAGATCTGCGCGGTGAGTTCATTCGAGGATGGGATGATGGCAGGGGCGTTGATTCAGGCCGTGCCCTTGGCAGCGCACAGGGACAGTTGATTGAGTCGCACGATCACGGAATGGACCCTTACAAGCCAATAAACGCCAATGTTCTGAAACCGGTAGCAAGTGGTGCTGAACTGTCATCGGTTGGGGTTGGTAACACGGTAAGAACAAGGCCAACTGGCGGTTCAGAAACCCGACCGCGCAACGTTGCATTGCTGTATTGCATTAAATTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3a9e67b71294d46da1b4c18d80861bd355845cad4df0e7740ae8a29ecaba0c8a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8162
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a bacteriophage as a biological control agent against Escherichia coli in compost and agricultural irrigation water Amarillas,L., Estrada,M., Lightbourn,L., Leon,R. and Lopez-Avenano,E. 2024-12-16 — GenBank