Protein

Genbank accession
YP_009804093.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MIQKVISGSKGGSQKPHKPVEMEDNLISINKIKILLAVSDGEVDETFNLKQLMFNSVPVQNEDGSFNFEGVTAEFRPGTQTQEYIKGMEDSSSEVTVNREITTDNPYTISVTNKTLSAIRIKMFMPRGVRIESNGDKNGVRVEYEVQQAVDSGSFETILTDVIEGKTMSGYDRSRRVNLPNFNNQVIFRIVRKTPDSDNSNVVDAIQVKSYAEVIDAKFRYPLTGLLFVEFDSKMFPNQLPTISIRKRWKIVNVPSNYDPESRTYNGNWDGTFKKAWTNNPAWVLYDLMINQRYGLDQKELGISVDKWALYEAAQYCDQMVPDGKGGTEPRYLCDVIIQSQTDAYKVIRDICSIFRGMSFWNGESISVIIDRPREPAYIFTNDNVVNGDFSYTFASEKSMYTTCNVMFDDEQNMYQQDVEPVFDREATLRFGNNVTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPTIGDVVAIADNFWSSNLTMNLSGRLLEVSGSQIFLPFRVDARAGDFIIVNKPDGKPVKRTISSVSADGKTIEVNIGFGFPVKPNTVFAIDRTDIALQQYVVTKIDKGDDDEEFTYKITAVEYDPNKYDEIDYGVNIDDRPTSIVEPDQIPRPENVQVSSESRIVQGMSVETMIVSWDKVPYAVFYDVQWRKDNGNWQNVPQTANKEVYVEGIYAGNYQVRVRSVAGSGTTSGWSNIVAATLTGKQGEPGRPINLTATDDVVFGIRTKWGFSDGSGDTAYTELQQSPDGTVDNASLLSLIPYPQHEYYHSPMPGGNIVWYRVRTVDRIGNVSQWTDFVRGMASTNVDDIIGEISVDIENSPGYEWLVDNATDNAAQNAANAEAAIENALANDKDAIYMKKENGKRKAEYTKSLKLIADETQARVTAIEQLKASFGDQISASNSELREVIATETGALSREIDQLKAEIGDDIQASLTDIREAIANETEARTQADLSLSARLGNNEAALSQKLDSWSNADSTGAMYGVKLGLKYNGQEYSAGMAMSLIGSGAAVKAQILFEASRFAIMTGMNGQTQYPFVVENGQVILSSAIIKDGFITNAMIGNWIQSNNWDGSNGWAINKNGDASFMNATVRGRIYANNGEFAFNGTNNTVQINNNGITVNLPNGGRVVVGVW
Physico‐chemical
properties
protein length:1149 AA
molecular weight: 127460,95740 Da
isoelectric point:4,81105
aromaticity:0,09138
hydropathy:-0,39043

Domains

Domains [InterPro]
IPR053171
3–862
IPR053171 IPR015406
IPR055385
92–217
IPR055385 IPR032876 IPR013783 Coil
IPR003961
628–722
IPR003961
IPR036116
628–715
IPR036116
YP_009804093.1
1 1149
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Sfin-1
[NCBI] 		2024314 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009804093.1 [NCBI]
Genbank nucleotide accession
NC_047998 [NCBI]
CDS location
range 36900 -> 40349
strand -
CDS
ATGATTCAAAAAGTGATAAGTGGATCTAAAGGTGGATCACAAAAGCCGCATAAGCCAGTTGAGATGGAAGATAATCTAATCTCAATCAACAAAATCAAAATTCTTCTGGCAGTATCTGATGGCGAGGTTGACGAAACATTCAACCTTAAGCAACTGATGTTTAACTCAGTCCCGGTGCAAAACGAGGATGGCTCTTTTAACTTTGAGGGCGTAACAGCAGAGTTCAGGCCGGGTACGCAGACTCAGGAATACATTAAGGGCATGGAGGATAGCTCCAGCGAGGTAACTGTAAACCGTGAGATTACTACCGATAATCCATACACGATCTCAGTAACCAACAAGACGCTGTCGGCAATCCGTATTAAAATGTTCATGCCTCGCGGCGTACGCATTGAAAGCAACGGCGATAAAAACGGCGTTCGCGTTGAGTACGAAGTGCAGCAAGCGGTTGATAGTGGTTCGTTTGAGACTATTCTTACTGACGTAATCGAAGGCAAAACAATGTCAGGTTACGATCGAAGCCGTCGTGTAAACCTGCCAAACTTCAATAACCAGGTTATATTCAGGATTGTTCGAAAGACTCCAGATTCTGATAATTCAAACGTTGTTGATGCGATTCAGGTAAAGAGCTATGCCGAGGTGATTGATGCCAAATTCCGTTACCCTCTGACAGGTCTTCTTTTCGTAGAGTTCGACTCGAAGATGTTCCCAAACCAGTTACCTACGATCTCAATTCGTAAGCGCTGGAAAATTGTAAACGTTCCGTCAAACTACGATCCGGAATCACGAACTTATAACGGAAATTGGGATGGCACTTTTAAGAAGGCGTGGACTAATAATCCGGCTTGGGTTCTTTATGACTTGATGATTAATCAGCGTTACGGGCTGGATCAGAAAGAGCTTGGAATATCTGTCGATAAATGGGCGCTATATGAGGCGGCGCAATATTGCGACCAGATGGTTCCTGACGGGAAAGGCGGTACGGAGCCTCGCTACCTTTGCGACGTGATAATTCAGTCACAGACTGATGCGTATAAGGTGATTCGAGATATTTGCTCAATCTTCCGTGGTATGAGCTTCTGGAATGGCGAAAGCATCTCGGTAATCATCGACAGACCGCGTGAGCCTGCTTACATCTTCACTAACGACAACGTTGTTAATGGTGACTTCTCCTATACGTTCGCAAGCGAAAAGAGTATGTACACGACGTGTAACGTGATGTTTGACGACGAGCAAAACATGTATCAACAGGACGTTGAGCCAGTATTCGATCGTGAGGCGACTCTGCGGTTCGGTAATAACGTAACCAGCATTACAGCGATCGGTTGCACACGTCGAAGCGAGGCCAACCGACGCGGGAGATGGATTCTGAAAACCAACCTCCGCAGCACTACGGTAAACTTCGCTACCGGTCTTGAGGGTATGATCCCGACAATCGGAGATGTTGTGGCAATAGCTGATAACTTCTGGTCAAGTAACTTGACGATGAACCTATCAGGGCGCTTGCTCGAAGTGTCTGGAAGTCAGATTTTCTTGCCGTTCCGGGTGGATGCACGCGCGGGTGACTTTATTATCGTAAATAAGCCAGATGGCAAGCCCGTGAAGCGCACAATCTCAAGTGTTAGTGCGGATGGTAAGACTATAGAGGTTAACATTGGCTTTGGCTTTCCTGTGAAGCCTAACACGGTATTCGCTATCGACCGCACAGACATTGCGTTACAGCAGTACGTCGTGACAAAAATCGATAAGGGTGATGACGATGAGGAATTTACCTACAAGATTACTGCGGTGGAGTACGATCCTAACAAGTACGATGAGATTGATTACGGTGTGAACATAGACGACAGACCGACGAGTATCGTTGAACCAGACCAGATCCCTAGACCGGAAAACGTGCAAGTGTCATCTGAGTCACGAATCGTCCAGGGGATGAGCGTAGAGACGATGATTGTAAGCTGGGATAAAGTGCCGTACGCAGTTTTCTATGATGTTCAGTGGAGAAAGGATAATGGCAACTGGCAAAATGTACCACAGACAGCAAACAAAGAGGTATACGTTGAAGGTATTTACGCTGGCAACTATCAGGTTCGCGTTCGCTCCGTAGCTGGTTCCGGTACGACTTCAGGATGGTCAAATATCGTAGCTGCGACGCTGACGGGCAAACAAGGTGAGCCGGGTCGACCGATTAACCTTACAGCTACGGATGATGTTGTTTTTGGTATCCGTACAAAATGGGGGTTCTCTGATGGTTCTGGAGATACGGCCTATACAGAGTTGCAACAGTCACCGGATGGAACGGTTGACAATGCGAGTTTACTCTCTCTGATCCCGTATCCGCAGCATGAGTATTATCATTCACCGATGCCGGGCGGGAATATTGTGTGGTATCGGGTAAGGACGGTTGATAGGATCGGTAACGTGTCTCAGTGGACTGATTTTGTCAGAGGTATGGCATCAACAAACGTTGACGATATCATTGGGGAGATTTCTGTCGATATCGAAAACTCGCCTGGTTACGAGTGGCTTGTTGATAACGCAACCGACAACGCGGCGCAGAACGCAGCTAACGCAGAGGCAGCAATAGAAAACGCGCTCGCCAATGACAAAGACGCGATCTACATGAAGAAGGAGAACGGAAAACGAAAAGCTGAGTACACGAAATCACTGAAACTTATTGCTGATGAGACGCAGGCACGAGTGACGGCGATCGAGCAATTGAAAGCAAGTTTTGGCGATCAGATTAGCGCTAGCAACAGCGAATTGCGTGAAGTTATCGCAACTGAGACTGGAGCGCTATCGCGTGAAATTGACCAACTCAAGGCAGAGATTGGTGATGATATCCAGGCAAGTTTGACTGATATCAGAGAGGCTATAGCAAACGAGACTGAGGCGAGAACGCAAGCTGACTTGTCGTTAAGCGCGAGGCTTGGGAATAATGAGGCAGCGCTTTCTCAAAAACTTGATTCGTGGAGCAATGCGGATTCGACTGGTGCAATGTACGGCGTCAAGCTCGGTCTGAAGTATAACGGACAAGAATACAGTGCAGGCATGGCTATGTCTCTGATTGGTTCCGGAGCTGCGGTTAAGGCGCAGATTTTGTTTGAGGCATCACGATTTGCAATCATGACAGGGATGAATGGTCAGACTCAGTACCCATTCGTTGTTGAGAATGGCCAGGTTATTCTAAGTAGTGCGATCATCAAGGATGGCTTTATTACTAATGCCATGATTGGAAACTGGATTCAATCTAACAATTGGGATGGGAGTAATGGGTGGGCCATAAACAAGAATGGCGACGCTTCATTCATGAATGCAACCGTGAGGGGTAGAATTTACGCAAATAACGGAGAGTTTGCATTTAACGGAACAAATAACACGGTTCAGATAAACAATAACGGTATCACGGTCAACTTACCTAACGGGGGTCGAGTGGTTGTTGGTGTCTGGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
b73a6ee99c51b0f188ab6cfcb0ccd588371dd4545f4f0b9efdf0794f7dab05b4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7755
Evidence 0,7755
Download PDB

Literature

Title Authors Date PMID Source
A novel bacteriophage with broad spectrum lytic activity against Shigella sp. and E.coliC Tousif,A.S.K. and Nabanita,G. 2023-11-29 — GenBank