Protein

View in Explore
Genbank accession
QJT69875.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MADYLTPAKLENASLDCDSWDKFFHGTEFEDVVTRLGKVFPTLPKVLKLFFDNGLFRPFQTEAQLLAYVPETNPSAAYAFDTKKLYSWDGSVWNDEGLSPLDLSKSYTDEQFILAVQKSVFETLSQLFGLAKSDDEKIKSLFTDAAGNVVIGYDLEKDTGIYAGMLEQVVEIVPGLKIYNDGRYLGLLGDSERRILIGYDMLSDLPIIAGLDELINGAGGTNTKPVPAERNHIVGYGQSLKTGATATVILSILQPYFNVTFGTGPRMDSAATSVIPLVEQFNNPSSDGYSNRGETCCSGAANYASRAMMLENGIDPKDHVIFASTAAHGGYRIDQLKKGSEWYSFLIKHITEAKRLSGDKTYKTQVIDWGQGENDAIYTVRTPYAVYKSELAQLQLDVSSDIKEITGQSETAPFITYQMSYAARTWPDIAKAQLDLVRESPYFMLSTPMYHMPYAEDSIHLTNVGYKWLGAYVGRAYKQYMIDGRKSDFINPKVAQLVGDEIHIHFDVPKAPLVLDTATLAATTDNGFKVLVNDTAATISGISAENDKVIIKLSSPPATGASVIVRYALDYLGAGLSIDGGASGNLRDSTTDSIEIAGVERPLYHVCPHFELTAFTDKGI
Physico‐chemical
properties
protein length:620 AA
molecular weight: 68026,02590 Da
isoelectric point:4,90455
aromaticity:0,10323
hydropathy:-0,15484

Domains

Domains [InterPro]
DC_0547
STR
77–615
DC_0547
SSF52266
STR
233–479
SSF52266
IPR036514
STR
258–481
IPR036514
IPR005181
ENZ
315–478
IPR005181
QJT69875.1
1 620
Architecture
STR
STR 77-615 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJT69875.1
1 620
Domain Start End Length (AA) Confidence
N-terminal 1 481 481 0,6545
Central domain 482 609 129 0,5937
C-terminal 610 620 10 0,6056
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-481
Central
482-609
C-terminal
610-620

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage fEg-Aba01
[NCBI] 		2736181 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJT69875.1 [NCBI]
Genbank nucleotide accession
MT344103.1 [NCBI]
CDS location
range 16079 -> 17941
strand +
CDS
ATGGCAGATTACCTAACGCCTGCAAAGTTAGAAAATGCTTCACTAGATTGTGATAGCTGGGATAAGTTTTTTCATGGTACTGAGTTTGAGGATGTAGTAACTCGACTCGGAAAAGTGTTTCCCACTCTTCCTAAGGTTTTAAAATTATTTTTTGATAATGGTTTATTTAGACCATTTCAAACAGAAGCTCAATTGCTTGCCTATGTTCCAGAAACAAACCCAAGTGCAGCTTATGCTTTTGATACGAAAAAGCTATATTCATGGGACGGCTCTGTTTGGAACGATGAAGGATTAAGTCCTTTAGACTTATCAAAAAGCTATACAGATGAACAATTTATTTTAGCTGTGCAAAAATCAGTTTTTGAGACGCTTTCTCAATTATTTGGCCTAGCTAAATCTGATGATGAGAAGATCAAATCTCTTTTTACTGATGCAGCGGGGAACGTTGTAATTGGTTATGACTTAGAAAAAGATACAGGCATTTATGCTGGAATGCTTGAGCAAGTTGTAGAAATTGTACCGGGATTAAAAATTTACAATGATGGTAGATATTTGGGTCTACTAGGTGATTCTGAAAGACGAATCTTAATCGGTTATGACATGCTTAGTGACTTGCCCATCATTGCGGGCCTTGATGAGTTGATCAATGGTGCGGGCGGCACAAATACAAAACCTGTTCCAGCCGAAAGAAACCATATTGTTGGATACGGACAGTCTTTAAAAACAGGTGCTACCGCAACAGTTATTCTAAGTATTCTTCAGCCTTATTTTAATGTGACATTCGGTACGGGTCCGCGTATGGACTCTGCTGCAACTTCGGTCATCCCATTGGTTGAGCAATTTAATAATCCAAGTTCAGACGGCTACAGCAATCGCGGTGAGACTTGTTGTTCTGGTGCTGCAAATTATGCAAGCCGTGCAATGATGCTTGAAAACGGTATTGATCCGAAAGATCATGTGATTTTTGCAAGCACTGCTGCACATGGTGGGTATCGTATAGATCAGTTAAAAAAAGGGTCTGAATGGTATAGCTTTTTGATTAAGCATATAACTGAAGCAAAACGGTTGAGTGGAGATAAGACTTACAAAACGCAAGTTATTGATTGGGGGCAGGGTGAAAATGACGCCATTTATACTGTTCGAACCCCCTATGCGGTTTATAAGTCTGAACTTGCACAGCTGCAGTTAGATGTAAGCAGTGATATTAAAGAAATCACCGGGCAATCTGAAACAGCACCATTTATTACTTACCAGATGTCATATGCTGCCCGCACATGGCCTGATATTGCAAAAGCTCAATTAGATTTAGTTCGAGAAAGCCCGTATTTTATGCTTTCAACACCTATGTATCACATGCCATATGCAGAAGACAGCATTCATTTAACAAATGTTGGTTACAAGTGGCTTGGTGCTTATGTTGGTCGAGCTTATAAGCAATATATGATTGATGGGCGAAAATCAGATTTCATCAACCCGAAAGTAGCTCAACTTGTAGGTGATGAAATACACATTCATTTTGATGTGCCGAAAGCGCCACTTGTGCTTGATACGGCAACTTTGGCTGCTACTACAGACAACGGCTTTAAGGTTTTAGTAAATGATACTGCGGCAACGATTTCCGGCATTAGCGCAGAAAATGACAAAGTTATTATCAAACTGTCTAGCCCACCTGCAACAGGTGCATCGGTAATTGTTAGATACGCCCTAGATTACCTAGGTGCTGGATTATCAATAGATGGCGGTGCTTCCGGCAATCTCCGTGATTCAACAACAGATTCAATTGAAATTGCAGGTGTAGAAAGACCGCTATATCACGTATGCCCGCATTTTGAATTAACTGCATTTACAGATAAAGGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e357a74061d5026fa7aa2d4b38fb2ed4eba8c1fd2b444daba732dd16b48a7d8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8202
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and functional analysis of a prophage of Acinetobacter baumannii Badawy,S., Pajunen,M.I., Haiko,J., Baka,Z.A.M., Abou-Dobara,M.I., El-Sayed,A.K.A. and Skurnik,M. 2020-05-31 — GenBank