Protein
View in Explore- Genbank accession
- WXX03327.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSP
- Protein sequence
-
MKRDELVSDLEKGKATFSEVSFRGEDLSGITIKGATFHDCDFTWCNLSNTDITYTAFWGGTLRHAVMREAKVRNVVFDHVVLSNSWIFESTLTDVEFRYCNFNSTKFRATQLGNLDLYLCTFLNSTIDECELSILGLTRTTFEYITGLDVYSVGPVGTFNGSVVYFPSLHKVFAGCWQGNEEEFFAKCTEVTIKHDAELNLDLATDMVKRFMKKEER
- Physico‐chemical
properties -
protein length: 217 AA molecular weight: 24741,71190 Da isoelectric point: 5,06784 aromaticity: 0,12903 hydropathy: -0,14608
Domains
Domains [InterPro]
G3DSA:2.160.20.80
STR
1–151
STR
1–151
SSF141571
STR
9–145
STR
9–145
IPR052949
Unmapped
16–133
Unmapped
16–133
IPR001646
STR
17–59
STR
17–59
1
217
Architecture
STR 1-151 | RBD 152-217
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
217
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 10 | 10 | 0,0023 |
| Central domain | 11 | 206 | 197 | 0,5039 |
| C-terminal | 207 | 217 | 10 | 0,9888 |
Note: Constraints were applied during segmentation.
Fixed 31 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 31 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-10
1-10
Central
11-206
11-206
C-terminal
207-217
207-217
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Brochothrix phage BtpYZU04 [NCBI] |
3134717 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Brochothrix thermosphacta [NCBI] |
2756 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WXX03327.1
[NCBI]
Genbank nucleotide accession
PP504779
[NCBI]
CDS location
range 93220 -> 93873
strand +
strand +
CDS
ATGAAAAGAGACGAATTAGTAAGTGACTTAGAAAAAGGTAAAGCAACATTTTCAGAAGTATCGTTTAGAGGTGAAGACTTAAGTGGTATAACCATCAAAGGTGCCACCTTCCATGACTGTGACTTTACATGGTGTAACTTAAGTAACACCGACATAACTTACACTGCATTTTGGGGAGGCACATTAAGACACGCAGTCATGCGAGAAGCTAAAGTAAGAAACGTAGTATTTGACCATGTTGTACTTTCAAATTCATGGATATTTGAGTCCACGTTAACAGACGTAGAGTTCCGCTACTGCAACTTTAATTCCACTAAGTTTCGTGCCACACAGTTAGGTAACCTTGACTTATACTTATGTACCTTTTTAAATAGTACAATAGACGAGTGTGAGTTATCAATATTAGGGCTTACTCGAACAACCTTTGAATATATCACAGGGTTAGATGTTTACTCAGTTGGTCCAGTAGGGACATTTAATGGTAGTGTCGTTTACTTCCCTTCTTTACACAAGGTATTTGCTGGTTGTTGGCAAGGTAACGAAGAGGAGTTCTTTGCTAAGTGTACAGAAGTAACTATTAAACATGACGCTGAACTAAACTTAGACTTAGCGACTGACATGGTTAAGCGATTTATGAAAAAGGAGGAACGTTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
7f59c9e3d189a828a153de559f9218a213196593166ddde265d4bbbbe52fa8f9
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50