Protein

View in Explore
Genbank accession
USM11623.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MDDFADLNRRLESLLREGTVIDVDHDARRVRVESGGLQTDWIRWLAQRTGASVEWDPPSIGEPGLLLCPSGEPTTGLFLPGVYCDGHDAPSSNPNEHVRVYADGARVAYDAQTGHLTVTGIKTATVQGSGTLTFDMPKVVFTGDVTIEGAGTVMKLLSYMAGLAGEGGDVGTVLRGNITHEGGTLRSNGVSVDQHDHVDSMGGTTSKGHG
Physico‐chemical
properties
protein length:210 AA
molecular weight: 22157,32810 Da
isoelectric point:4,92609
aromaticity:0,05238
hydropathy:-0,28000

Domains

Domains [InterPro]
IPR037026
ATT
1–86
IPR037026 G3DSA:6.20.150.10
IPR013046
Unmapped
8–207
IPR013046
IPR006531
STR
16–83
IPR006531 IPR040629
DC_1459
STR
70–209
DC_1459
USM11623.1
1 210
Architecture
ATT
STR
ATT 1-86 | STR 87-209 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USM11623.1
1 210
Domain Start End Length (AA) Confidence
N-terminal 1 101 101 0,7188
Central domain 102 199 99 0,0249
C-terminal 200 210 10 0,9960
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-101
Central
102-199
C-terminal
200-210

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Carl1
[NCBI] 		2951185 Uroviricota > Caudoviricetes > Peduoviridae > Kisquinquevirus Carl1 >
Host Burkholderia cenocepacia
[NCBI] 		95486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
cadc4a149823c76bb70590044a70d7ae46f31a3750dd65918194e88e0d9f540d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8851
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50