Protein

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Genbank accession
QIA28516.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLDRLDKFMLGSSAQQELSNNTTNVGALQRKFKSKEVDVVEDYKVVKGVLGNAAALIQQAIDECAPLGIWVIVPKGDYYLEKSLIVKAGLKLLVHKDAKMLRYHNDCMVLNGVSGNTVGQSNIWIEGGSWDCRGNVIADDGSAFAMGYASNITLRNLKIYNVNFSHGMEICAIDTADIEFCEGYGFIDAGGTRTTAEFIQIERGTSAGFPYFGSGDSTIARNIRVKRCKVGASDVAPSFNVGLGSHDTQTAYGGDNIYIADCDFSQAVEMGVDLRGYTNVVIERTKMKGKQGLGIYHDGTTISNIVIRDCDITGTAGSGIRMDAVKKIIIESTKIVGSTNAIYGTTVVDLDICNKTDLSGQSSDALTFLSNSVNISVTRSIIRLAGRHGVNIYDNTSHVRLRDNEIIDVTTNVFNFAGSNTKLVFITGNLVLDTTLTNVVSATAGVDKLVFKENVYPSSVTTPINSAATNSNVLAADNYTF
Physico‐chemical
properties
protein length:481 AA
molecular weight: 51791,98220 Da
isoelectric point:5,59025
aromaticity:0,07484
hydropathy:-0,01850

Domains

Domains [InterPro]
IPR011050
STR
49–346
IPR011050 IPR006626 IPR006626
IPR012334
STR
52–301
IPR012334 IPR006626
IPR006626
Unmapped
149–172
IPR006626 IPR039448
IPR039448
ENZ
253–430
IPR039448
IPR006626
Unmapped
254–276
IPR006626
QIA28516.1
1 481
Architecture
STR
ENZ
STR 49-346 | ENZ 347-430 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIA28516.1
1 481
Domain Start End Length (AA) Confidence
N-terminal 1 52 52 0,9667
Central domain 53 470 419 0,9968
C-terminal 471 481 10 0,1401
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-52
Central
53-470
C-terminal
471-481

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage f2b1
[NCBI] 		2708592 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIA28516.1 [NCBI]
Genbank nucleotide accession
MN940411.1 [NCBI]
CDS location
range 18611 -> 20056
strand +
CDS
ATGTTGGATAGATTAGATAAGTTCATGCTGGGTAGTTCCGCCCAGCAAGAGCTTTCAAATAACACCACTAACGTTGGAGCCTTACAACGGAAGTTTAAAAGCAAGGAAGTTGATGTAGTAGAAGACTACAAAGTAGTTAAAGGCGTACTGGGTAATGCGGCTGCACTTATTCAGCAGGCTATCGATGAATGTGCTCCCCTAGGTATCTGGGTGATCGTCCCTAAAGGGGATTACTATTTAGAAAAGTCCTTAATTGTTAAAGCAGGGTTAAAACTACTCGTACATAAAGATGCTAAGATGTTACGTTACCATAATGACTGTATGGTACTTAACGGGGTATCTGGAAATACAGTAGGTCAAAGTAACATCTGGATTGAGGGTGGAAGCTGGGATTGTCGAGGTAATGTGATTGCTGACGATGGCTCTGCATTTGCTATGGGTTACGCAAGTAACATCACACTCCGTAACCTAAAAATCTACAATGTTAACTTCTCACATGGTATGGAAATATGTGCGATTGACACAGCAGATATTGAGTTCTGTGAAGGCTACGGATTTATTGATGCAGGCGGTACTCGTACTACAGCAGAGTTCATTCAAATTGAGCGTGGTACATCTGCCGGGTTCCCTTACTTTGGCTCAGGTGATAGTACAATAGCTAGAAATATTCGAGTGAAGCGATGTAAAGTGGGTGCCTCAGACGTAGCCCCTTCGTTTAACGTAGGTCTTGGCTCCCATGACACGCAAACTGCCTACGGTGGGGATAACATCTATATAGCGGATTGCGACTTCTCACAGGCGGTTGAAATGGGTGTAGACCTAAGAGGATACACAAATGTAGTAATCGAACGTACGAAGATGAAAGGGAAGCAAGGTCTGGGTATCTACCATGATGGTACAACTATCTCTAACATTGTTATAAGAGATTGTGATATCACAGGTACAGCTGGCTCAGGTATCCGTATGGACGCAGTAAAGAAAATCATAATTGAAAGCACAAAAATTGTTGGTTCTACAAATGCTATCTACGGAACTACAGTTGTAGACCTTGACATCTGTAACAAGACCGATCTTTCGGGTCAGTCTAGTGATGCATTAACATTCCTATCAAACTCTGTAAACATCTCAGTTACTCGTTCAATTATCCGTCTAGCAGGTAGACACGGAGTTAACATTTATGATAACACTTCCCACGTTAGACTTCGGGATAATGAGATCATCGATGTTACAACAAACGTGTTTAACTTTGCAGGTAGTAATACAAAGCTAGTATTTATCACAGGGAATCTAGTATTAGATACAACGTTAACAAACGTAGTGAGTGCTACGGCAGGTGTTGATAAACTAGTGTTCAAAGAGAACGTATACCCTAGCAGTGTTACTACACCAATCAACTCAGCCGCAACAAACAGCAATGTTCTAGCTGCGGATAATTACACATTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a5fe301f5b8465bdf0ce8d9431b32255e0c32c8246c21171d3d99d878c63c228
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8812
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50