Protein

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Genbank accession
QGZ17935.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYTGVNKSTSYFNVKNYSGNGNANHAITGVGFQPDFTWIKRTDSATNHHLHNAVRGATKVLYSNSTTNESTDAQKLTSFDSDGFTVGTNGDANNGSGGFTSWNWKANGAGSSNSDGSITSTVSVNQTAGFSIVNWTGTGSAATIGHGLNAVPKTIIVKKTDGSGSASWVVYNGNLTYSKYITLNGSAAAANSDATVWNNTAPTSSVFSVGSWGDVNGNGVNILAYVFADKTGYCKTGRYDGIGSSDGNFIYLGFKPTYFLVKRYDTTGSWTIKDGTNSGAILSAANTPNHANPNETANPTANNTNANNKASAYGMDFLSNGVKIRGDDGEINTNGGDYIYLALGQTLVGSNNVPCTAR
Physico‐chemical
properties
protein length:359 AA
molecular weight: 37463,15810 Da
isoelectric point:7,72058
aromaticity:0,10306
hydropathy:-0,41755

Domains

Domains [InterPro]
IPR055906
STR
8–344
IPR055906
QGZ17935.1
1 359
Architecture
STR
STR 8-344 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC103P
[NCBI] 		2686458 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17935.1 [NCBI]
Genbank nucleotide accession
MN698242.1 [NCBI]
CDS location
range 35967 -> 37046
strand -
CDS
ATGGCATACACAGGAGTAAATAAATCTACAAGTTATTTTAATGTTAAAAACTATAGTGGTAATGGAAATGCAAACCATGCTATCACAGGAGTAGGATTTCAACCAGATTTTACATGGATTAAAAGAACAGATTCTGCAACTAACCACCATTTACATAATGCTGTAAGAGGTGCTACAAAAGTTTTATATTCTAATTCTACTACTAATGAAAGTACAGACGCACAAAAACTTACTTCATTTGATAGTGATGGATTTACAGTTGGTACAAATGGTGATGCTAACAATGGTTCTGGAGGTTTTACATCTTGGAATTGGAAAGCAAATGGTGCAGGTTCATCAAATTCAGATGGTTCTATTACATCTACTGTATCTGTAAATCAAACAGCAGGATTTAGTATTGTAAATTGGACAGGTACTGGTTCAGCAGCAACTATTGGACATGGATTAAATGCTGTTCCAAAAACAATTATAGTTAAAAAAACAGATGGTAGTGGTTCAGCAAGTTGGGTAGTTTATAATGGTAATCTTACTTATAGTAAATATATAACTCTTAATGGTTCAGCAGCAGCAGCAAATTCAGATGCTACTGTTTGGAATAATACAGCTCCAACAAGTTCAGTTTTTAGTGTAGGAAGTTGGGGAGATGTAAATGGAAATGGTGTTAATATACTTGCATATGTTTTTGCAGATAAAACTGGTTATTGTAAAACAGGTCGTTATGATGGTATTGGTAGTAGTGATGGAAATTTTATATATCTTGGATTTAAACCAACATACTTTTTAGTTAAAAGATACGACACTACTGGAAGTTGGACTATAAAAGATGGTACAAATAGTGGTGCAATACTTAGTGCTGCTAATACTCCAAATCATGCTAACCCTAATGAAACAGCAAATCCAACAGCTAATAATACTAATGCTAATAATAAAGCATCTGCGTATGGAATGGACTTTTTAAGTAATGGAGTAAAAATTAGAGGTGATGATGGAGAAATTAATACCAATGGTGGAGATTATATATATCTAGCACTTGGTCAAACTTTAGTAGGTTCAAATAATGTACCATGTACAGCAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5acb3558a117669c684dafc4c6a29622db593a1b488522032f7b4345ccc15b80
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8653
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank