Protein

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Genbank accession
YP_009790528.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTPKTVRTYALDGTKKDFTIPFEYLARKFVVVTLIGATRRELILNTEYRFTTNTTITTNKAWGPADNFDLIEIRRLTSATERLVDFADGSILRAYDLNISQVQSLHIAEEARDLTADTIGVNNDGDLDARARKIVNLADGVNDGDAVNLRQQKQWAGSALNSANASAASAAASESSRQASLAQAQASAASAAASLTYSQNSQQSAVNSFTSESNSLNYAQASQAARDLSQAWSSKAEDSVVSGSLYSSYHYSRKSAASATASQTSATNSANSASFSTTEANRATTQADRAKTEADKLGNFNGLAGALDSVNGTTVVWKGDQISKTGKFISRSDSEANFTFAKADGTDLIRLVRTADRGVQLYGDLSGDGSRMLWSATGVTVPKTLTVNGQTTLSGTQVNGNISMTGSLLAAGNVQAKGGNLNVYAAAANANSHVWYYNSDGATRGIIYAGTDNAIRIQGGSNVVAATFDQAGGSTFNYLSANRGSNQSFFYSPYAQLDGSMYGTCCLQLQGTGGGVANLGFHNAGRVAGALWLNTDNQLWWMQNSGNNQQLTTNQNVMNHIGGMTADQVGSIASMYNQSGANSGPNGGVAGSGLRFASHNNVSGTAGSGSWRCLGSGNNGGVCNYVRYA
Physico‐chemical
properties
protein length:631 AA
molecular weight: 66154,54330 Da
isoelectric point:7,63861
aromaticity:0,07765
hydropathy:-0,33914

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604
DC_0264
STR
1–629
DC_0264
YP_009790528.1
1 631
Architecture
ATT
STR
ATT 1-131 | STR 132-629 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009790528.1
1 631
Domain Start End Length (AA) Confidence
N-terminal 1 247 247 0,8809
Central domain 248 446 200 0,4700
C-terminal 447 631 184 0,9488
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-247
Central
248-446
C-terminal
447-631

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage KNP
[NCBI] 		2783802 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Ghunavirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009790528.1 [NCBI]
Genbank nucleotide accession
NC_047827.1 [NCBI]
CDS location
range 34769 -> 36664
strand +
CDS
ATGGCTACTACACCAAAGACGGTGCGGACCTACGCTCTCGACGGCACCAAGAAAGACTTCACGATCCCCTTCGAGTATCTCGCTCGGAAGTTCGTTGTGGTCACCTTGATCGGTGCAACTCGACGTGAGCTGATCCTGAACACCGAGTACCGCTTCACTACCAACACGACCATCACCACGAATAAGGCATGGGGACCGGCTGATAACTTCGACCTGATCGAGATTCGCCGACTGACCTCTGCAACTGAGCGTCTGGTGGACTTCGCTGATGGTTCGATCCTTCGGGCCTACGACCTGAACATCTCGCAGGTTCAATCTCTGCACATCGCTGAGGAAGCCCGTGACCTGACCGCTGACACAATCGGCGTGAACAACGATGGTGACCTCGATGCCCGTGCCCGTAAGATCGTCAACCTCGCCGATGGCGTGAACGATGGTGATGCTGTCAACCTGCGCCAGCAGAAACAATGGGCAGGCTCTGCGCTGAACTCTGCGAACGCCAGTGCTGCCTCTGCGGCTGCCTCTGAGTCGTCCCGTCAGGCTTCCTTGGCGCAGGCCCAAGCGAGTGCTGCAAGTGCTGCTGCATCTCTGACCTACTCTCAGAACTCCCAACAGTCTGCCGTCAACTCGTTCACCAGCGAGTCCAACTCTCTGAACTACGCTCAAGCCTCTCAGGCTGCCCGCGACTTGTCTCAAGCGTGGTCCTCGAAGGCTGAAGATAGCGTGGTCTCTGGGTCCCTCTATTCGTCCTACCACTACAGCCGCAAGTCGGCAGCGAGTGCAACTGCGAGTCAGACCTCTGCGACCAACTCTGCGAACTCTGCGAGTTTCTCCACGACTGAAGCCAACCGGGCAACCACTCAGGCAGACCGTGCGAAGACCGAGGCTGACAAGTTGGGCAACTTCAACGGCCTCGCTGGTGCTCTGGATTCCGTAAACGGAACGACCGTTGTCTGGAAGGGTGACCAGATCAGCAAGACTGGTAAGTTCATCTCCCGGTCTGACTCCGAGGCGAACTTTACGTTTGCTAAGGCTGATGGCACCGACTTGATCCGCCTCGTCCGTACCGCTGACCGTGGAGTTCAACTCTATGGTGACCTGAGTGGTGATGGCAGCCGGATGCTTTGGAGCGCTACCGGTGTGACCGTGCCAAAGACCCTGACTGTTAATGGCCAGACTACCCTGTCAGGCACTCAGGTCAATGGCAACATCTCGATGACCGGTAGTCTTCTCGCAGCAGGTAACGTGCAGGCCAAGGGAGGAAACCTTAATGTCTACGCTGCTGCTGCTAACGCAAACTCCCACGTCTGGTACTACAACTCTGACGGGGCTACACGCGGGATCATTTACGCGGGCACCGACAACGCCATCCGAATTCAAGGTGGTTCCAACGTTGTGGCTGCTACGTTCGATCAAGCTGGCGGTTCGACATTCAACTACCTGAGTGCAAACCGTGGAAGCAACCAGTCCTTCTTCTACAGTCCGTATGCGCAGCTCGATGGCTCCATGTACGGCACTTGCTGCCTTCAACTTCAAGGAACTGGTGGTGGTGTAGCAAACCTCGGTTTCCACAACGCTGGTCGTGTGGCTGGTGCCCTGTGGTTGAACACTGACAACCAGTTGTGGTGGATGCAGAACTCTGGAAACAACCAGCAGCTCACCACCAACCAGAACGTAATGAACCACATCGGCGGTATGACTGCTGACCAAGTTGGTTCTATCGCGTCCATGTACAACCAGTCCGGTGCCAACAGCGGCCCTAACGGTGGGGTTGCAGGTAGTGGATTGCGGTTTGCTTCCCACAACAACGTTTCCGGCACTGCTGGTTCTGGCTCGTGGCGATGCCTCGGTTCTGGCAACAACGGCGGGGTATGTAACTACGTCCGCTACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
742baf3b63b53b7ffc5a7b11f3de980b8dc63f9e83ebb79cb2f1e81e5183e81a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6569
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of two novel autographiviruses infecting bacterium from Pseudomonas fluorescens group Barylski,J., Nowicki,G. and Walkowiak-Nowicka,K. 2017-05-27 — GenBank