Protein

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Genbank accession
UDY80756.1 [GenBank]
Protein name
adhesin
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MAKTPYVDLSTQDILSAHISGLAHSINKIEDVLNMKTSQATFTLNPVADQEEIALRYRIYEGQHRNWITFALRRNGQSVNSDEYIAQPEFGVVVFHTPQAQTDVVEVTATFITNGSNKIDEIDSSISNVQTEISSVNSDVSSLQTELSGVQSNISSLQSSVSSLESNVSSLETEVQNLKDNSGGGGEGYPPGGIYIPIRQPSRSIFTNIRPDKTISDLTNPSTNILMAAGKADAIPVIIDHRTKITRLQMYGGTGTAGGNVIMGIYGDSATQPSDLIAQTDVFTMGSGNIVRNLIEPVWLTPGLYWLVRWGENGIRLDGYAYQPGVHIEFEPVPSNLMDGTGPIIGVRSPVMSGLTSLPTEFPAVGANSNDSKYLSREYIGTVYALR
Physico‐chemical
properties
protein length:387 AA
molecular weight: 41878,31870 Da
isoelectric point:4,79223
aromaticity:0,06977
hydropathy:-0,19845

Domains

Domains [InterPro]
DC_2041
STR
70–180
DC_2041
G3DSA:1.20.5.340
STR
96–182
G3DSA:1.20.5.340
Coil
Unmapped
154–181
Coil
UDY80756.1
1 387
Architecture
STR
STR 70-182 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Geobacillus phage GR1
[NCBI] 		2890879 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Geobacillus stearothermophilus
[NCBI] 		1422 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UDY80756.1 [NCBI]
Genbank nucleotide accession
OK896991 [NCBI]
CDS location
range 63518 -> 64681
strand -
CDS
ATGGCTAAAACCCCTTATGTAGATTTATCTACTCAAGATATTTTATCAGCTCATATTTCTGGTCTGGCTCACTCAATAAATAAGATTGAAGACGTTTTAAATATGAAAACATCCCAAGCTACTTTCACTCTTAATCCTGTGGCAGACCAAGAAGAAATCGCTTTGCGTTACCGAATATATGAAGGTCAGCATAGAAACTGGATTACATTTGCTCTTAGAAGAAATGGACAGTCGGTAAATTCAGATGAGTATATTGCTCAACCAGAATTTGGAGTTGTAGTTTTCCATACTCCTCAAGCTCAAACAGATGTTGTTGAAGTTACAGCAACATTCATTACTAACGGTTCAAATAAGATTGATGAAATTGATTCCTCTATTTCGAATGTTCAAACTGAAATTTCGTCTGTTAATTCTGATGTTTCTTCTCTTCAAACTGAATTATCTGGAGTTCAGTCTAATATTTCATCTCTTCAATCTAGTGTTTCTTCTTTGGAATCTAACGTTTCTTCCTTGGAAACAGAAGTCCAAAATTTAAAGGATAATTCTGGTGGTGGAGGTGAGGGTTATCCTCCAGGTGGAATTTATATTCCTATCAGACAACCATCAAGATCTATATTCACAAATATTCGGCCAGATAAAACAATTAGTGATTTAACAAATCCATCAACAAACATCCTAATGGCTGCTGGAAAAGCTGATGCAATTCCAGTTATCATTGACCATCGAACAAAAATTACTAGGCTTCAAATGTATGGAGGAACTGGAACTGCTGGAGGAAATGTAATAATGGGAATCTATGGAGATTCAGCAACTCAACCATCTGATTTAATTGCACAAACTGATGTGTTTACTATGGGTTCAGGTAATATTGTTAGAAATTTGATTGAGCCAGTTTGGTTGACACCAGGATTATACTGGTTAGTTCGTTGGGGAGAAAATGGAATTAGATTAGACGGATATGCGTATCAACCTGGTGTTCATATTGAATTTGAACCTGTTCCTTCAAACCTAATGGATGGAACAGGCCCGATCATAGGAGTTAGATCACCAGTGATGTCTGGTTTAACTTCACTTCCAACAGAATTTCCAGCAGTAGGAGCAAACTCAAATGATTCTAAATATCTATCAAGAGAATATATTGGAACAGTTTATGCTCTCCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4e4109a629a52869ff4e7166e8c8ccae516814e50e34015ab790f153d57c180
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7102
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
LysGR1, a novel thermostable endolysin from Geobacillus stearothermophilus bacteriophage GR1 Choi,D. and Kong,M. 2023 37275144 GenBank