Protein

Genbank accession
YP_010747922.1 [GenBank]
Protein name
tailspike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSGCGDVLSLNDLQVAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGINDANKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFGGKTLTIDCKAKFIGDGMLIWEQLGEGSVVNQPHMQTQTTPYTVYRFDDNGNWVTNPSTVLASVAQRMDKGYKPSVNDLDIWANLPDNVKNQVAGATLRIVSGDNIIVENPEATFGGYLFTLCNRILVKNPRNFIAWESGITFENHQTAAWGTGNWVVGGEIKYGSGSAVLFIRNDGGDDHNGGVRDLISYRVGESGVKTYQNEIGGRSARNYRLVFDNITTIQCYYDGIDANADTGAPTERVDDYTLAEYPWFHLPTQHIIRNIITRDCMGIGAWWDGQKNIIDNVVTYEAHKEGIFDRGTNNDITNVTVIGANKDLTNLNQLTCEGGSRLRGVMIHAYSTQGYAVYAPGSEISSVSCAGSGTKKILCTYVGDIQGGNINVQHGDNDMTLAMRPAMGGTINPSLLMTASCQVASPGNEASIVKLSAIQGGERVGEMQLNRLGFKHMSIPVASLQLPESALEHNSSIGFFFGSDGVLRILAKKPDGTYVTYTLS
Physico‐chemical
properties
protein length:676 AA
molecular weight: 72987,80950 Da
isoelectric point:5,15748
aromaticity:0,08876
hydropathy:-0,23639

Domains

Domains [InterPro]
G3DSA:2.10.10.80
65–136
G3DSA:2.10.10.80 IPR012332
IPR040775
71–132
IPR040775 IPR011050
IPR015331
138–675
IPR015331
YP_010747922.1
1 676
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage LPSE1
[NCBI] 		1929963 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010747922.1 [NCBI]
Genbank nucleotide accession
NC_073204 [NCBI]
CDS location
range 37064 -> 39094
strand +
CDS
ATGTCTAGTGGTTGCGGTGATGTATTGTCACTTAACGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAAACAGGGTGGTGTAGCGGGTGGCGCGGATATCGACTACGCCACTAACCAGGTAACAGGGCAGACGCAGAAGACGCTGCCAGCGGTCTTACGTGACGCCGGTTTCTCTCCGGCATCTTTTAACTTCACAACCGGCGGAACCCTGGGAATTAACGACGCCAATAAAGCTGTTCTTTGGCCGAAAGAAGATGGCGGGGACGGTAACTATTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCTGCGGCGTCTACCCCTCTTACGACAGGCGGCATTTCGGATTCCGCTTGGGTTGCGTTCGGAGATATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAGTACTCCGTTAAGCTGTCTGACTTTACTACGTTACAACAATTGGCGGATGCCGCTGTTGATAGTGTTCTTATCGACCGCGATTACACTTTCAGCAATAACGAGACCGTTAACTTCGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATTGGTGATGGCATGTTAATATGGGAGCAACTCGGCGAAGGGTCTGTTGTGAACCAGCCGCACATGCAGACACAAACCACGCCGTACACGGTGTATAGATTCGACGACAACGGTAACTGGGTGACTAACCCATCAACGGTGCTGGCGTCGGTAGCCCAAAGGATGGATAAGGGGTATAAGCCAAGCGTTAACGATTTAGATATTTGGGCCAACCTTCCTGATAATGTAAAAAATCAGGTTGCTGGTGCAACTTTGCGAATAGTGAGCGGCGATAATATCATCGTAGAGAACCCAGAAGCTACATTTGGTGGGTATCTGTTCACACTCTGTAATCGTATTCTCGTAAAAAATCCACGTAATTTTATTGCCTGGGAGTCTGGTATTACATTTGAGAACCATCAAACAGCCGCATGGGGTACTGGTAACTGGGTGGTCGGTGGTGAGATAAAATACGGTTCTGGTTCTGCAGTTTTATTTATCAGAAATGACGGTGGTGATGATCACAATGGAGGGGTAAGGGATTTAATATCATATCGCGTTGGCGAATCTGGTGTTAAGACATATCAGAATGAAATCGGGGGACGGTCAGCCAGGAACTACCGTTTGGTGTTCGACAATATAACTACAATCCAGTGTTATTATGATGGGATTGATGCTAATGCTGACACGGGGGCGCCAACCGAACGTGTAGACGATTACACTCTTGCTGAGTACCCATGGTTCCATTTACCTACTCAGCACATCATCCGCAATATCATTACACGTGACTGTATGGGTATCGGCGCGTGGTGGGATGGGCAAAAAAATATCATTGATAATGTTGTAACCTACGAAGCCCATAAAGAGGGGATTTTCGACAGGGGTACTAACAATGATATTACTAACGTAACAGTTATAGGTGCAAACAAGGATTTAACTAACCTAAATCAGCTTACGTGCGAAGGCGGCAGCAGATTGCGCGGAGTGATGATTCACGCATACTCTACACAAGGGTATGCCGTATACGCGCCGGGTTCCGAAATATCGTCTGTTTCGTGCGCGGGTTCTGGTACGAAAAAGATACTTTGTACGTATGTTGGTGATATTCAGGGTGGGAACATAAACGTACAGCATGGTGATAACGACATGACCCTGGCTATGCGCCCGGCAATGGGGGGCACAATAAATCCATCATTACTTATGACAGCAAGTTGCCAAGTAGCATCACCTGGTAATGAAGCTAGTATTGTCAAGCTTTCGGCAATCCAGGGAGGGGAGCGTGTGGGTGAGATGCAGCTTAACCGCTTAGGCTTTAAACACATGAGCATACCTGTTGCGTCTTTACAATTACCAGAAAGTGCTTTAGAACATAACTCATCTATAGGCTTTTTCTTTGGAAGTGATGGGGTGCTGAGAATCCTCGCCAAGAAACCAGACGGGACTTACGTAACCTACACCTTATCCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
166a5ef19ce54fed9c15642481565a99864f9914834f68d86cc76e76919a5876
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7173
Evidence 0,7173
Download PDB

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Salmonella enterica Serovar Enteritidis Bacteriophage LPSE1, Isolated in China Huang,C., Dong,X., Shi,J., Li,Z., Chen,D., Li,J. and Wang,X. 2015-02-26 — GenBank