Protein

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Genbank accession
BBL19237.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MKMTVTKALTEIKKLDKQIAKLTQRSQFIMTSTRGRISGFATVDDATKAIKSNMEKVRALMKRRAEIKAKVTASNAATKLSLAGTEMTVAEAIERKDSIEMEENLLQVMKNQFNQAVNAQARHEAKVQDEIDRKVEQVFGNVKKLDANDGTYKAIKQQVEDANKFELVDPNKLADEIEKLEESIDDFKSNVDVELSVANATTEIELSE
Physico‐chemical
properties
protein length:208 AA
molecular weight: 23295,30270 Da
isoelectric point:5,74718
aromaticity:0,03365
hydropathy:-0,56635

Domains

Domains [InterPro]
DC_0027
STR
1–208
DC_0027
Coil
Unmapped
5–25
Coil
BBL19237.1
1 208
Architecture
STR
STR 1-208
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage KIT04
[NCBI] 		2508207 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BBL19237.1 [NCBI]
Genbank nucleotide accession
LC487410.1 [NCBI]
CDS location
range 37894 -> 38520
strand -
CDS
ATGAAAATGACAGTAACTAAAGCACTAACTGAAATCAAAAAACTAGACAAACAAATCGCTAAGCTAACACAGCGTAGTCAGTTTATTATGACTAGCACTCGTGGTCGAATTTCAGGTTTTGCTACTGTAGACGACGCTACTAAAGCGATTAAATCCAATATGGAAAAGGTTCGTGCATTGATGAAGCGTCGTGCTGAAATCAAAGCAAAAGTTACTGCCTCTAACGCAGCGACTAAGCTATCCCTTGCGGGTACTGAAATGACTGTAGCGGAAGCTATTGAACGTAAAGATTCCATCGAGATGGAAGAAAACCTTCTTCAAGTCATGAAAAATCAGTTCAACCAAGCCGTGAATGCCCAGGCACGTCACGAAGCTAAAGTCCAAGACGAGATTGACCGTAAGGTTGAGCAAGTGTTTGGTAACGTTAAGAAACTAGATGCTAACGATGGTACTTACAAGGCAATCAAACAGCAAGTAGAAGATGCAAACAAGTTCGAGCTTGTTGACCCTAATAAACTTGCAGACGAAATCGAGAAGCTTGAAGAGTCTATTGACGACTTCAAGTCGAATGTTGATGTTGAGCTATCTGTAGCCAACGCAACTACAGAGATTGAACTCTCTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
42226a8d1cef2d33d0a4b263fb5185748e1ce88259a21fe3e5d4608240156187
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9427
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio parahaemolyticus bacteriophage KIT04 Vo,T.T.A., Pham-Khanh,N.H. and Kamei,K. 2023-02 — GenBank