Protein

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Genbank accession
YP_009908010.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MNILKKLMQRLCGHGKHDDREDGELLTAQLRLGPADILESDENGIIPEQDRVITQVVILDADKKQIQCVVRPLQILRADGRWENIGGMK
Physico‐chemical
properties
protein length:89 AA
molecular weight: 10070,55380 Da
isoelectric point:5,60992
aromaticity:0,01124
hydropathy:-0,43483

Domains

Domains [InterPro]
DC_0291
ATT
1–27
DC_0291 IPR009640
YP_009908010.1
1 89
Architecture
ATT
RBD
ATT 1-27 | RBD 28-89
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SH2026Stx1
[NCBI] 		2108115 Uroviricota > Caudoviricetes > Sepvirinae > Traversvirus SH2026Stx1 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009908010.1 [NCBI]
Genbank nucleotide accession
NC_049919.1 [NCBI]
CDS location
range 42445 -> 42714
strand +
CDS
ATGAACATACTAAAAAAACTTATGCAGCGTCTGTGCGGGCACGGAAAGCATGATGACCGTGAAGACGGGGAGTTACTTACAGCACAGCTGCGACTGGGACCGGCAGACATTCTGGAGTCAGATGAGAATGGCATTATCCCGGAGCAGGACAGGGTAATCACGCAGGTGGTGATACTGGATGCGGATAAAAAGCAGATACAGTGCGTGGTAAGACCGCTGCAAATCCTGCGTGCTGACGGGAGGTGGGAAAATATTGGCGGGATGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d838f4f6cdcbe910f4f709db56a807fba1164c504dc21ec82bd65066e69db90f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7195
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete nucleotide sequence of Stx1 converting bacteriophage SH2016Stx1 Sheng,H., Duan,M., Hunter,S.S., Minnich,S.A. and Hovde,C.J. 2018-06-21 — GenBank