Protein

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Genbank accession
QJA43164.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MKTTSNEFREHLDGEVTAVCTCWKIKRRDGVVLRFTDADQDVKRGGAVYRSIGAYKRSAIESTSDLSVDNLEVSGMATDLALPVEELRAGAYDHAEIEVFMTSWLQPIGGRLRLRKGFFGEVRVLPNGTFTVELRGIMQRLAHTFTDTYSSTCRHDLGDVGCGVPLSGGLRQEGAHYPFPILDAGFEEVGRVGLGASYTWYNPVNEENLLDSGSTYSGTYAARGSTLGGRLQQDVSLLSMDEEFLDHLDSKQVELFLHGWRQDDGDEGRVTARFLDGQMRELRAESGSMGANGGFITLPEVRVVGDWTVEMWLNPSEIDTHSLWSYRQGNVNEDTLRVLYYDSVGKKLLYRAHEDGDVVEEHLAEIPFKEKVGEWYHTAVVSEAGVLKIYVNGELMFTGGVFTGDLYISNMCRGYAGGGFKGRVDEFRVWNVARTQAEINANRWNDLPSGDPTLERYYPFDGDSADYGINETTALTIPYLSDLRTPVAVAHRGPTTAATTGFANVGTNWTLVETGAVSVPPNTRYVRVQFEHRAASGTPEGTRLDSLFGWFKDDASQRVMPVLTSADPDAFVRGAMVTTGGSNRIFRAMVDEPRASHDGWFQGGLVTFYSGKNAGASMEVKRWTAESKQIELFLSLPFPVEQGDLFTIYPGCDKSRIGCAVIFNNVVNFFGTPDVPGEDELFRYPDSK
Physico‐chemical
properties
protein length:688 AA
molecular weight: 76172,17900 Da
isoelectric point:4,97196
aromaticity:0,10610
hydropathy:-0,33154

Domains

Domains [InterPro]
PF09931
ATT
5–164
PF09931 DC_1958 G3DSA:2.60.120.200 DC_2270 IPR018964
DC_0733
STR
12–165
DC_0733 IPR013320 IPR018964
IPR011928
Unmapped
23–166
IPR011928 PF13385
G3DSA:2.60.120.200
STR
296–476
G3DSA:2.60.120.200
IPR006558
LEC
305–437
IPR006558
QJA43164.1
1 688
Architecture
ATT
STR
RBD
ATT 5-164 | STR 165-476 | RBD 477-679 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJA43164.1
1 688
Domain Start End Length (AA) Confidence
N-terminal 1 306 306 0,7107
Central domain 307 518 213 0,3980
C-terminal 519 688 169 0,2793
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-306
Central
307-518
C-terminal
519-688

Taxonomy

  Name Taxonomy ID Lineage
Phage Phaeobacter phage MD18
[NCBI] 		2723761 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Phaeobacter inhibens DSM 17395
[NCBI] 		391619 Pseudomonadota > Alphaproteobacteria > Rhodobacterales > Roseobacteraceae > Phaeobacter > Phaeobacter inhibens

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJA43164.1 [NCBI]
Genbank nucleotide accession
MT270409 [NCBI]
CDS location
range 135585 -> 137651
strand -
CDS
ATGAAGACCACAAGCAATGAATTCCGCGAACACCTTGATGGTGAAGTAACGGCTGTCTGCACCTGCTGGAAGATCAAGCGGCGTGATGGAGTGGTCCTGCGCTTTACGGACGCTGATCAGGACGTGAAGCGCGGCGGGGCAGTGTATCGATCCATCGGGGCCTACAAGCGTTCTGCAATCGAATCCACCTCTGACCTTTCCGTTGACAACCTTGAAGTATCTGGGATGGCAACTGATCTCGCGCTCCCTGTTGAGGAGCTGCGCGCTGGGGCCTATGACCACGCAGAGATTGAGGTCTTCATGACTTCTTGGCTGCAGCCTATCGGTGGGCGGCTGCGTCTTCGTAAGGGGTTCTTTGGCGAAGTGCGCGTTCTGCCGAACGGCACCTTCACGGTAGAGCTTCGCGGGATTATGCAGCGGCTCGCCCACACTTTCACGGACACCTACTCATCCACTTGTCGCCATGATTTGGGGGATGTCGGATGCGGTGTTCCGCTTTCCGGGGGGCTTCGTCAGGAGGGCGCGCATTACCCCTTTCCGATCCTTGATGCAGGGTTTGAAGAAGTCGGTCGGGTCGGGCTTGGAGCTTCGTACACTTGGTACAATCCAGTGAACGAGGAAAACCTTCTCGATAGCGGCTCCACCTACTCAGGGACCTATGCGGCACGGGGATCGACTCTTGGGGGGCGTCTTCAGCAGGACGTTTCACTGCTGTCGATGGATGAGGAATTCTTGGATCACTTGGATAGCAAGCAGGTCGAATTGTTCCTCCACGGATGGCGGCAGGATGATGGAGACGAGGGGCGGGTAACGGCTCGGTTCCTCGATGGTCAGATGCGAGAGCTTCGCGCGGAGTCTGGTTCCATGGGCGCCAATGGTGGGTTCATCACCCTACCGGAAGTGCGGGTCGTCGGGGACTGGACGGTTGAGATGTGGTTGAACCCGTCGGAAATCGATACCCACAGTCTCTGGAGCTACCGACAGGGCAATGTAAACGAGGATACCTTGAGGGTTCTCTATTACGACTCTGTGGGCAAGAAGCTCCTCTACCGAGCGCATGAAGATGGTGATGTTGTAGAGGAGCATCTCGCGGAAATCCCGTTCAAAGAAAAGGTAGGGGAGTGGTATCACACCGCCGTCGTCAGTGAGGCGGGAGTTTTGAAGATTTACGTGAACGGGGAACTGATGTTCACCGGCGGAGTATTTACAGGCGATCTGTACATCTCAAATATGTGCCGAGGTTACGCAGGCGGTGGTTTTAAGGGACGCGTGGACGAGTTCAGGGTTTGGAACGTCGCGCGCACACAGGCGGAAATCAACGCCAACCGATGGAACGACCTCCCCTCCGGGGACCCAACCTTGGAGCGCTACTACCCATTCGATGGGGACAGTGCTGACTATGGGATCAATGAAACGACGGCGCTGACGATCCCGTACTTGTCGGACCTTCGGACGCCAGTGGCTGTTGCACATCGGGGCCCGACGACCGCGGCAACCACCGGGTTCGCGAATGTCGGAACCAATTGGACCTTGGTTGAAACAGGCGCAGTGAGCGTGCCGCCCAATACGCGATACGTTCGTGTCCAGTTTGAGCATCGCGCGGCATCCGGGACCCCCGAAGGAACTCGTTTGGACAGCCTTTTTGGGTGGTTCAAGGACGACGCCAGCCAGCGCGTGATGCCGGTTTTGACATCAGCAGACCCGGATGCATTCGTGCGTGGGGCTATGGTGACCACAGGTGGGTCGAACAGGATTTTCCGAGCGATGGTTGATGAACCTCGCGCATCGCATGACGGGTGGTTTCAGGGCGGACTGGTGACCTTCTACTCCGGAAAGAACGCGGGCGCTTCGATGGAGGTCAAGCGGTGGACGGCAGAGAGTAAGCAGATCGAGCTGTTCTTGTCTTTGCCCTTCCCTGTTGAGCAGGGGGACCTGTTCACAATCTACCCCGGCTGCGACAAGTCACGGATCGGCTGCGCAGTCATTTTCAACAACGTGGTCAACTTCTTCGGGACCCCGGATGTGCCGGGTGAAGATGAGTTGTTCCGGTACCCGGACTCAAAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2fb6696d918d9b6ab78af24b5750df520f5a387ab5bbb19a19139c8a86ca2c07
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7326
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Discovering the Molecular Determinants of Phaeobacter inhibens susceptibility to Phaeobacter phage MD18 Urtecho,G., Campbell,D.E., Hershey,D.M., Whitaker,R.J. and O'Toole,G.A. — — GenBank