Protein

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Genbank accession
BDR25241.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MNNPLSLQELSLATAPTEDKVKVLLMFNRTSEVFLQSVGYLPLDAFDAKSREHTIFVEAEMGTYDVVVSNTPGKQPTLSDWKIVPKEEAPQVITEDHLNSKVAYKITERYPVAEQINILARAIKQLAEKYGQELDELEEMLDYIDLVKRTNRAHKEALIESPDVIYKSREDLDAEKAHRYAGGLHELIGPRKIDQGRVFS
Physico‐chemical
properties
protein length:200 AA
molecular weight: 22726,54770 Da
isoelectric point:5,13202
aromaticity:0,07000
hydropathy:-0,45050

Domains

Domains [InterPro]
DC_1649
STR
1–200
DC_1649
Coil
Unmapped
120–140
Coil
BDR25241.1
1 200
Architecture
STR
STR 1-200
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage sp. 30-1
[NCBI] 		2972141 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BDR25241.1 [NCBI]
Genbank nucleotide accession
LC727696 [NCBI]
CDS location
range 37476 -> 38078
strand -
CDS
ATGAATAATCCGTTATCACTCCAAGAACTATCTTTAGCTACTGCACCTACTGAAGATAAAGTAAAAGTACTATTAATGTTTAACCGTACTTCTGAGGTATTCCTACAAAGCGTGGGCTATCTACCTTTAGATGCATTTGATGCTAAGTCACGTGAGCACACCATTTTTGTTGAAGCAGAAATGGGTACTTATGATGTAGTCGTAAGTAATACACCTGGTAAACAACCTACCCTTTCTGATTGGAAGATTGTTCCTAAAGAAGAAGCGCCACAAGTGATTACTGAAGATCACTTAAATAGTAAAGTGGCCTACAAAATTACTGAACGCTATCCAGTGGCTGAGCAAATTAATATCCTTGCACGTGCAATTAAACAGCTAGCTGAAAAATATGGTCAAGAGTTAGATGAACTAGAAGAAATGCTTGATTATATTGATCTTGTTAAACGAACTAATCGCGCGCATAAGGAGGCCCTAATTGAGAGCCCAGACGTTATCTATAAATCCAGGGAAGATCTCGACGCTGAGAAAGCACATCGATATGCAGGTGGCCTGCATGAGCTTATCGGCCCACGAAAGATCGACCAGGGACGTGTTTTCAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
61f9e3f5c1ea1a4c9802d3a8af6c7deb28c100bc12dbd5f12fd820c5dfc94123
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3648
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-Genome Sequence of Pseudomonas phage 30-1 Fujiki,J., Nakamura,T., Nakamura,K., Tamamura,K., Ichikawa,N., Ishiguro,Y. and Iwano,H. 2021-07 — GenBank