Protein

Genbank accession
AFK13438.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MANVIKTVLTYQLDGSNRDFNIPFEYLARKFVVVTLIGVDRKVLTINADYRFATRTTISLTKAWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPFGQLKTMNQNSWQARNEALQFRNEAETFRNQTEVFKNESGTNATNTKQWRDEANGSRDEAEQFKNTAGQYATSAGNSATAAHQSEVNAENSATAAANSANLAEQHADRAEREADKLGNFNGLAGAIDRVDGTNVYWKGGIHANGRLYLTSDGFDCGQYQQFFGGSAGRYSVMEWGDENGWLMHVQRREWTTAIGDNIQLVVNGHIIAQGGDMTGPLKLQNGHALYLESASDKAQYILSKDGNRNNWYIGRGSDNNNDCTFHSYVYGTNLTLKPDYAVVNKRFHVGQAVVATDGNIQGTKWGGKWLDAYLNDTYVKKTMAWTQVWAAASGSYMRGGSQTDTLPQDLRFRNIWIKTRNNYWNFFRTGPDGIYFLSAEDGWLKFQIHSNGRVFKNIADRYAPPTAIAVEDV
Physico‐chemical
properties
protein length:558 AA
molecular weight: 62219,94290 Da
isoelectric point:6,04110
aromaticity:0,10573
hydropathy:-0,57491

Domains

Domains [InterPro]
IPR005604
1–131
IPR005604 Coil G3DSA:6.20.80.10 G3DSA:6.20.70.20 G3DSA:2.60.320.30
IPR048388
371–463
IPR048388 IPR022246
AFK13438.1
1 558
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage YpP-R
[NCBI] 		1176765 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFK13438.1 [NCBI]
Genbank nucleotide accession
JQ965701.1 [NCBI]
CDS location
range 32756 -> 34432
strand +
CDS
ATGGCTAACGTAATTAAAACCGTTTTGACTTACCAGTTAGATGGCTCCAATCGTGATTTTAATATCCCGTTTGAGTATCTAGCCCGTAAGTTCGTAGTAGTAACCCTTATTGGCGTAGACCGCAAGGTCCTTACGATTAATGCAGACTACCGTTTTGCTACGCGTACTACCATCTCACTTACCAAGGCTTGGGGTCCAGCGGATGGATACACTACCATCGAGTTACGCCGAGTAACCTCCACAACCGACCGATTGGTTGACTTTACGGATGGTTCAATCCTCCGTGCGTATGACCTTAACGTCGCTCAGATTCAAACGATGCACGTAGCGGAAGAGGCCCGTGACCTCACTGCTGATACCATAGGTGTCAATAATGATGGTCATTTGGATGCTCGTGGTCGTCGAATTGTTAACCTAGCGAACGCTGTGGATGACCGCGACGCTGTTCCGTTTGGTCAACTTAAGACCATGAACCAGAACTCGTGGCAGGCGCGTAATGAGGCACTACAGTTCCGTAATGAGGCTGAGACTTTCAGAAATCAAACGGAGGTTTTTAAGAATGAGTCCGGTACTAACGCTACGAACACAAAGCAGTGGCGAGATGAGGCTAATGGGTCCCGAGATGAAGCCGAGCAGTTCAAGAATACGGCTGGTCAATACGCTACATCTGCTGGGAACTCTGCTACTGCTGCGCATCAATCTGAGGTAAACGCTGAGAACTCCGCTACAGCAGCAGCGAACTCTGCGAATTTGGCAGAACAACACGCAGACCGTGCGGAACGTGAAGCAGACAAGCTGGGGAATTTTAATGGACTGGCTGGTGCAATTGACAGGGTGGATGGAACCAATGTGTACTGGAAAGGAGGTATCCATGCGAACGGACGCCTTTACCTTACCTCAGATGGTTTCGACTGTGGTCAGTATCAACAGTTCTTTGGTGGTTCTGCTGGTCGTTACTCTGTCATGGAGTGGGGTGATGAGAACGGATGGCTGATGCATGTTCAACGTAGAGAGTGGACAACAGCGATAGGTGATAACATCCAGCTAGTAGTAAACGGACATATCATCGCCCAAGGTGGAGACATGACTGGTCCGCTGAAATTGCAGAATGGACATGCCCTTTACTTAGAGTCCGCATCCGACAAGGCGCAATATATTCTATCTAAAGATGGTAACAGAAACAACTGGTACATTGGTAGAGGATCAGATAACAACAATGACTGTACCTTCCACTCCTATGTGTATGGTACGAACTTAACACTCAAGCCGGACTATGCAGTAGTTAACAAACGCTTCCACGTAGGTCAGGCAGTTGTAGCCACTGATGGTAATATTCAAGGTACTAAGTGGGGAGGTAAGTGGCTTGATGCTTACCTAAACGATACTTACGTTAAGAAGACAATGGCCTGGACTCAAGTATGGGCTGCTGCTAGTGGTAGTTACATGAGAGGAGGTTCTCAGACTGATACTCTCCCACAGGACTTGCGATTCCGCAACATATGGATTAAGACCAGAAACAACTATTGGAACTTCTTCCGAACTGGTCCTGACGGTATCTACTTCCTTTCAGCCGAGGACGGTTGGCTAAAATTCCAGATACACTCTAATGGCAGGGTATTTAAGAACATAGCGGATAGATATGCGCCTCCAACAGCAATAGCCGTAGAGGACGTGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
d80b009022fb672290626551547c1c9dd640ed8b2ce166890938dce88ce4687d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7263
Evidence 0,7263
Download PDB

Literature

Title Authors Date PMID Source
A Yersinia pestis-specific, lytic phage preparation significantly reduces viable Y. pestis on various hard surfaces experimentally contaminated with the bacterium Rashid,M.H., Revazishvili,T., Dean,T., Butani,A., Verratti,K., Bishop-Lilly,K.A., Sozhamannan,S., Sulakvelidze,A. and Rajanna,C. — — GenBank