Protein

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UniProt accession
A0A8S5UK39 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MRSNCVIRWFKKEKLLKILSIMMILSLIFSGYTIYKVFTLKPGQAVTISGGTKVEKPVTNITNAQIDKDGNLVLTYSDGEARNVGSIVGSNGKDGADGKTPTNSEIALAIKTYCLTNKCSENPTSAQVMSAVAAYCSGGICNGTNSKNASDEQIATAVAKYCAAGLCKGDRGSTGATGATGATGANGANGADGKDGKDGKDGASPQLSCVNTKDNSGNQTSWVAWKYEGEANTAYRRLYKIDGDSNCINI
Physico‐chemical
properties
protein length:250 AA
molecular weight: 26072,03950 Da
isoelectric point:8,76469
aromaticity:0,06000
hydropathy:-0,32360

Domains

Domains [InterPro]
DC_1665
STR
25–248
DC_1665
A0A8S5UK39
1 250
Architecture
STR
STR 25-248 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ct9A73
[NCBI] 		2825225 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF94762.1 [NCBI]
Genbank nucleotide accession
BK016096 [NCBI]
CDS location
range 35959 -> 36711
strand +
CDS
ATGAGAAGTAATTGCGTCATTCGATGGTTCAAAAAGGAAAAACTACTAAAAATCCTATCGATCATGATGATTTTAAGCCTTATATTCAGTGGCTACACCATCTACAAGGTATTCACACTCAAACCAGGCCAAGCCGTGACCATTTCAGGCGGTACAAAGGTGGAGAAGCCTGTTACGAACATCACAAACGCCCAGATAGACAAGGATGGCAACCTGGTGCTTACATATTCAGACGGAGAAGCTCGCAATGTAGGCTCTATCGTTGGCTCTAACGGTAAAGACGGGGCTGACGGCAAGACACCAACAAACTCAGAGATAGCGCTAGCCATCAAGACATACTGCCTTACCAACAAATGTTCAGAGAACCCCACAAGCGCCCAGGTAATGAGCGCTGTTGCTGCTTATTGCTCAGGTGGTATATGTAACGGTACGAACAGTAAGAACGCATCAGACGAGCAGATAGCAACCGCTGTGGCTAAATACTGTGCGGCAGGACTATGCAAGGGCGATAGAGGGTCTACGGGTGCTACCGGGGCTACAGGCGCGACAGGAGCTAATGGCGCTAACGGTGCTGACGGCAAGGATGGGAAGGACGGCAAAGATGGTGCATCTCCTCAGCTATCGTGCGTCAACACCAAGGATAATTCAGGTAACCAAACATCATGGGTAGCATGGAAGTACGAGGGTGAAGCCAATACCGCGTACCGTCGGCTATACAAGATCGATGGTGATAGCAACTGTATTAATATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bfaf1386b2005d784139a24330cca0c9a6679e8e44f3de4d003fda56fcb0f62f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7285
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50