Protein

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Genbank accession
QPB12359.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MAENKSFRATYGLDASNQKVINVAKADKTVLTDGVNVDFFIEENTIQKYDETRGYSKDFAVIFEGRVYFANRDIPKPAGTFDPVKWTHVRVDPKWISVINTPQDGYNLESGNFITADTNSNELLFNLPKTPKDGDTIAIKDIGGYVGYKSLRVKKSIHDIKWNDLYRDEIYITRPYSQTYFIFSRGLWNALVLENEDSAKIVSSQPIKQKLSSGDRVYRRSSTGKIDLVLPKYAMHGDLIEFYDIDSLTPINHMTVEVSEDSGHSVELLGQTSVTVRTSGSGRLAFDGSENIWRVWEGDLRTRLKLITENYKILPNEAILVFGANNSEKKTITIDLPKDVELGDTVEISLNYMRKGQKVNIKASTGDTISTSKSLLQFPKRSEYPPETAWVTVPNIEFDGTLDYVPYIRLSYVLQNGKTTWIIQEVNPTVERVDSTARERLGVIALASQAQANVDKEKNPEKELAITPETLANRVALETRRGIARIATTAEVNKLSVDSYDDDTIITPKKLNGRSATETRRGLAELATQEKTNKGEDDLTIVTPKKLHNRKASETLTGIAKIVASKGTPGTQRDVPGTGVYSFNNNTDIVTPAALHENLATKTALGTVFLATETEVIEAPVMDPKFPVVVTPVELHKKTATESRIGFAKIATQDETNKGAIDNAIVTPKKLNDRKASETLTGIARIATQTEFNQGTLNDVISSPLKVKTYFNSTARIQTNTATGIKHTGTLWENFKLEILPASELQVGSAKIATKALVDAGTDDTTIVTPKKLHDKKSTETSEGIIKVSTYEQTIAGTSANTAISPKNFVLAIRTEKNGLEATTTNRGFVRITQDASIWTGDDVVGSTGTYEHDGYAVSPRELNKALSHYLPIKATAVNSALLNGIKSDQFIRRDINQEVNGILTMNKETVMKAPLNSTSTGKFTTLDLTSTGISLKLGNSTGWSGLHILGQGGWSLFSASDTNFKIQPIDAQNPDNIEMFSINRTSGNVDIAKNLNVGGVLNAFSVQVRSKDAIRLNGTRILYGNNTTPLQFATPNASDIVVSEAVDQYKVITTKNLVEESNKTYLRKGGDTATGTINFSKPIFVRRAPVANSKQSPENGIFVSEVVDKSMYDTYPGIAVPQYDDQNKITEYKYVKGPGTLIQIGDSKDFTFRIWVPKALDKTANHNNHSIWMQTYNTAKGELEDWGRVFTTQSPPTAADVGAVSESGSSINNITVREWMQVGNLRLVPNPVTKTVDYIWVD
Physico‐chemical
properties
protein length:1243 AA
molecular weight: 136941,54410 Da
isoelectric point:6,79251
aromaticity:0,07401
hydropathy:-0,40306

Domains

Domains [InterPro]
DC_1946
ATT
1–209
DC_1946 DC_1209
IPR048391
ATT
1101–1191
IPR048391
QPB12359.1
1 1243
Architecture
ATT
STR
ATT
STR
ATT 1-209 | STR 344-1100 | ATT 1101-1191 | STR 1192-1224 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPB12359.1
1 1243
Domain Start End Length (AA) Confidence
N-terminal 1 380 380 0,8322
Central domain 381 592 213 0,0531
C-terminal 593 1243 650 0,3900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-380
Central
381-592
C-terminal
593-1243

Taxonomy

  Name Taxonomy ID Lineage
Phage Providencia phage PSTCR6
[NCBI] 		2783548 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Providencia stuartii
[NCBI] 		588 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB12359.1 [NCBI]
Genbank nucleotide accession
MW057858 [NCBI]
CDS location
range 68931 -> 72662
strand -
CDS
ATGGCCGAGAATAAATCTTTCCGAGCTACGTATGGCTTGGATGCTTCAAATCAAAAAGTAATTAACGTTGCAAAGGCAGACAAAACTGTTCTCACCGATGGTGTTAACGTTGATTTCTTTATTGAAGAAAATACAATACAAAAATATGATGAAACACGTGGTTATTCAAAAGACTTCGCAGTTATATTTGAAGGGCGTGTGTATTTCGCCAACAGGGATATTCCTAAACCAGCCGGAACGTTTGATCCGGTTAAATGGACCCACGTTCGTGTTGACCCAAAATGGATTTCTGTAATTAATACCCCACAAGACGGGTATAATTTAGAATCAGGTAACTTTATCACGGCCGATACGAATTCAAATGAATTATTATTTAATTTACCAAAAACACCAAAAGACGGCGATACAATCGCAATCAAAGATATCGGTGGCTACGTAGGGTATAAATCTCTCAGAGTTAAAAAATCTATCCACGATATAAAGTGGAACGATTTATACAGAGATGAAATATATATTACTCGCCCGTATTCGCAAACTTACTTCATTTTTAGTCGAGGACTTTGGAATGCCTTGGTTCTCGAAAATGAAGATTCAGCTAAAATTGTATCATCTCAGCCGATTAAGCAGAAACTTTCATCTGGGGATCGTGTTTATAGAAGATCATCTACAGGTAAAATTGATTTGGTTCTACCTAAATATGCAATGCATGGTGATCTGATTGAATTTTATGACATAGATTCTTTGACGCCTATTAATCATATGACCGTTGAAGTTTCTGAAGATTCAGGGCATTCAGTAGAATTATTGGGTCAAACATCTGTAACTGTCCGTACTTCTGGTTCTGGTAGATTAGCCTTTGATGGTTCAGAAAATATTTGGCGTGTCTGGGAAGGCGATTTAAGAACCAGGCTTAAATTAATTACTGAAAACTATAAAATTCTCCCTAACGAGGCTATTTTAGTTTTTGGTGCAAATAATTCTGAAAAGAAAACTATTACTATTGATCTACCTAAAGATGTTGAATTAGGGGACACTGTAGAAATTTCTCTTAATTACATGAGAAAAGGTCAAAAGGTTAATATTAAAGCATCAACCGGAGACACAATTTCTACTAGTAAGTCATTGTTGCAGTTCCCTAAAAGATCTGAATATCCACCCGAGACAGCCTGGGTCACAGTACCTAATATCGAATTTGACGGGACTTTGGACTATGTTCCTTATATCAGATTATCTTATGTTCTCCAAAATGGTAAAACAACTTGGATTATCCAAGAAGTTAATCCTACTGTAGAACGTGTCGATTCGACGGCTAGAGAACGTCTTGGTGTTATTGCTTTAGCGTCCCAGGCCCAAGCTAATGTCGATAAAGAAAAAAATCCAGAGAAAGAACTAGCGATAACGCCGGAAACATTAGCTAATCGAGTGGCTTTAGAAACTCGGCGTGGTATTGCTAGAATTGCAACAACAGCCGAAGTTAATAAACTGAGCGTTGATTCTTATGATGACGATACTATTATCACGCCTAAGAAACTTAATGGGCGTTCTGCAACGGAAACTCGTCGTGGGCTGGCCGAACTAGCGACACAAGAGAAAACTAATAAAGGCGAAGACGATTTAACTATTGTTACGCCTAAAAAGCTGCATAATAGAAAAGCATCCGAGACTTTAACAGGTATTGCTAAGATAGTAGCCTCTAAGGGCACACCAGGGACCCAACGTGACGTTCCGGGAACAGGGGTTTATAGTTTCAATAACAATACGGACATAGTCACTCCTGCGGCGTTACACGAAAACCTGGCAACTAAAACTGCACTCGGGACAGTGTTTTTAGCTACAGAAACCGAAGTTATCGAAGCACCGGTAATGGATCCTAAGTTCCCGGTTGTTGTTACACCTGTAGAACTTCATAAAAAGACGGCAACAGAATCTAGGATCGGATTCGCTAAAATTGCGACACAAGACGAAACTAATAAAGGGGCAATTGATAACGCGATTGTTACGCCTAAAAAGTTAAATGACCGAAAAGCTTCCGAGACTTTAACCGGTATCGCTAGAATTGCAACGCAAACGGAGTTCAACCAAGGAACTTTAAATGACGTGATTTCTTCACCGCTTAAAGTCAAAACTTATTTTAACTCGACTGCTAGAATTCAAACAAACACGGCGACTGGTATTAAACACACCGGGACTTTGTGGGAAAACTTTAAATTAGAAATTTTGCCTGCGTCAGAACTTCAAGTTGGGTCTGCTAAAATAGCAACTAAAGCTTTAGTTGATGCTGGAACAGACGATACGACTATTGTTACCCCTAAAAAGTTGCATGATAAAAAATCAACCGAAACATCAGAAGGTATCATCAAAGTTTCTACCTATGAGCAAACAATCGCAGGAACTTCGGCCAATACGGCTATTTCGCCTAAGAACTTTGTCTTAGCAATAAGAACAGAGAAAAATGGACTAGAAGCTACGACTACAAATCGTGGATTCGTCAGAATAACCCAAGATGCTTCTATTTGGACTGGTGACGACGTTGTAGGTTCCACCGGAACTTACGAGCATGACGGTTACGCTGTTTCTCCAAGAGAATTAAACAAAGCATTAAGTCATTATTTACCGATCAAGGCCACAGCAGTTAATTCAGCATTATTGAATGGTATTAAATCGGACCAATTTATTCGTAGAGATATAAACCAAGAAGTTAATGGTATATTAACTATGAATAAAGAAACTGTTATGAAAGCACCTTTGAATTCAACTTCAACAGGTAAATTCACAACACTAGATTTAACGTCTACTGGTATTTCACTAAAACTTGGTAACAGTACTGGTTGGAGTGGTTTACATATTCTAGGACAAGGCGGTTGGTCTTTATTTAGTGCTTCTGATACCAACTTTAAGATTCAGCCAATCGATGCACAGAATCCTGATAATATCGAAATGTTCAGTATTAACAGGACTTCCGGTAATGTTGACATTGCAAAAAATCTTAATGTCGGCGGTGTTTTAAATGCATTTAGTGTCCAAGTTCGTTCTAAAGATGCTATCCGGTTAAATGGAACCCGGATATTATACGGTAATAATACAACTCCATTACAGTTTGCTACTCCTAATGCCAGTGACATTGTTGTTAGTGAAGCAGTGGACCAGTATAAGGTTATTACAACTAAAAACTTGGTCGAAGAATCGAATAAAACATATTTGAGAAAAGGTGGAGATACTGCTACAGGAACTATCAATTTTAGTAAACCTATTTTTGTTAGAAGAGCTCCTGTTGCTAATAGCAAGCAATCCCCTGAAAACGGTATTTTTGTTTCTGAGGTCGTGGATAAATCGATGTATGATACTTATCCAGGTATCGCGGTTCCTCAATATGACGATCAGAATAAAATTACCGAATACAAATATGTTAAAGGGCCGGGTACGTTAATTCAAATTGGTGATTCTAAAGACTTTACTTTTAGAATCTGGGTTCCAAAAGCTCTTGATAAAACTGCTAACCACAATAACCATTCTATTTGGATGCAGACCTATAACACGGCTAAAGGCGAATTGGAAGATTGGGGACGAGTTTTCACAACCCAAAGTCCTCCAACTGCTGCTGATGTTGGTGCGGTTTCGGAATCAGGTTCATCCATTAACAATATAACAGTTAGAGAATGGATGCAAGTGGGCAATTTAAGGCTTGTTCCTAATCCAGTTACTAAAACTGTTGACTATATTTGGGTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0a76696c5bddd5d9722627d21611a9e6253ff656bb446d58b593460b5d7c90c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5720
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel bacteriophages targeting Providencia spp. as potential agents for phage therapy Rakov,C., Alkalay-Oren,S., Coppenhagen-Glazer,S. and Hazan,R. 2021-04-02 — GenBank