Protein

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Genbank accession
WDQ27596.1 [GenBank]
Protein name
tail tubular protein A
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MATEVSICSNALRRLGDDPITSLTDDTERARLCNSFYADARDSVLRMHPWNFAITRASLAQLTDKPAYGFTYQYALPTNPYCLRVLGMEYEDYIFKVENYSTQGRVLLTNESTAKILYVARITDTTQFDALFVDVLTAKLAVDLVYPITNSANLQTQMQKLYQLKLSEARSIDGQEGFIDDLVSDTFIDFRKD
Physico‐chemical
properties
protein length:193 AA
molecular weight: 21946,55520 Da
isoelectric point:4,74909
aromaticity:0,10881
hydropathy:-0,20052

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage EXVC032P Baldr
[NCBI] 		3029571 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDQ27596.1 [NCBI]
Genbank nucleotide accession
OQ414636 [NCBI]
CDS location
range 9965 -> 10546
strand +
CDS
ATGGCTACAGAAGTATCAATATGTTCAAATGCATTAAGAAGATTGGGTGATGATCCTATAACATCTTTAACAGACGACACGGAAAGAGCAAGATTGTGTAATTCATTTTACGCAGATGCTAGAGATTCTGTATTAAGAATGCATCCGTGGAATTTTGCAATTACTAGAGCAAGTTTAGCACAATTAACAGACAAACCTGCATATGGTTTTACATATCAATATGCATTACCTACTAACCCTTACTGTTTAAGAGTATTAGGTATGGAATATGAAGATTATATTTTTAAAGTAGAAAATTATTCAACACAAGGTAGAGTTTTGCTTACTAACGAAAGCACAGCTAAAATATTATATGTTGCAAGAATAACAGACACAACACAATTTGATGCTTTGTTTGTAGATGTACTAACGGCAAAACTTGCTGTAGATTTAGTATATCCAATTACAAATAGTGCTAATTTACAAACACAAATGCAGAAACTTTATCAATTAAAACTTTCCGAAGCACGAAGTATTGATGGACAAGAAGGATTTATAGATGATCTTGTTTCTGATACTTTTATTGACTTTAGGAAAGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
773f52b3b4495edaa5292526d78b1186e918f6f824cb30c37d1a2c0fdc9f3dec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9263
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Draft Genome Sequences of Pelagipodophages Hodr EXVC031P and Baldr EXVC032P, Isolated from the Sargasso Sea Lewis,P.J., Buchholz,H.H., Michelsen,M.L. and Temperton,B. 2014-05 — GenBank