Protein

View in Explore
Genbank accession
QXV72280.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MEHSDIPAGERHAPHNWVVADEAARLALAPTEEDLLKYLWQQSDNTEWVLSAVAPAVWRQRVGDPGPVGATGATGATGATGATGATGATGPKGDPGEQGPAGATGSKGDTGATGPAGPTGATGPKGDTGATGPTGPTGATGPKGDTGATGPTGPTGATGPAGTDATVTATSVGSVYASLPAKTTPVDADKIAIADSAASGALKGSLLSGFKTWIKGWITSADVGLGNVNNTSDANKPISTATQAALDAKAAVAAVREKLTAARTYYVRTDGNDSNTGLANTVGGAFLTIQKAIDTAAALDIGIHSVAINVGAGTFGPFSTKDPVGNGSVAVTGAGMGSTTISTSSGSCITAPLGSRKYSVAGFRLTTSDSSFAGNGLNIDINSQLSAGELDFGPCGNFHVNSSGMVILRGYTISGPARVHWYASNGATVICAGWTIVISGSVSFSTAFAYADCMSLLRVNENTYSGTATGVRYQIFANSVLFVNGAGESYLPGNSAGSKFTGAQYA
Physico‐chemical
properties
protein length:506 AA
molecular weight: 50055,61700 Da
isoelectric point:5,53785
aromaticity:0,06522
hydropathy:-0,05672

Domains

Domains [InterPro]
DC_1073
STR
1–503
DC_1073
PTHR24637
Unmapped
61–163
PTHR24637 IPR011050
IPR008160
STR
63–119
IPR008160 IPR012334
QXV72280.1
1 506
Architecture
STR
STR 1-503 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV72280.1
1 506
Domain Start End Length (AA) Confidence
N-terminal 1 281 281 0,9642
Central domain 282 480 200 0,9606
C-terminal 481 506 25 0,9720
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-281
Central
282-480
C-terminal
481-506

Taxonomy

  Name Taxonomy ID Lineage
Phage Acidovorax phage ACF1
[NCBI] 		2856860 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acidovorax citrulli
[NCBI] 		80869 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV72280.1 [NCBI]
Genbank nucleotide accession
MZ547449.1 [NCBI]
CDS location
range 50679 -> 52199
strand -
CDS
ATGGAACACAGTGACATCCCCGCCGGCGAGCGCCACGCGCCGCACAACTGGGTGGTGGCCGACGAGGCTGCCCGGCTGGCGCTCGCGCCGACCGAAGAGGACCTGCTGAAGTACCTCTGGCAGCAGTCGGACAACACTGAGTGGGTGCTGTCCGCCGTGGCGCCGGCGGTGTGGCGGCAGCGCGTCGGTGATCCAGGCCCGGTCGGGGCAACCGGCGCCACAGGGGCAACCGGCGCCACAGGGGCAACCGGCGCCACAGGGGCGACCGGACCAAAGGGCGATCCAGGTGAACAAGGACCTGCCGGCGCGACCGGGTCGAAAGGGGATACAGGAGCAACTGGTCCCGCAGGGCCGACAGGAGCAACTGGTCCCAAGGGGGATACAGGAGCAACTGGTCCCACGGGACCGACGGGCGCAACTGGTCCCAAGGGGGATACAGGAGCAACTGGTCCCACGGGACCGACGGGCGCAACTGGTCCTGCGGGCACAGATGCGACGGTAACTGCAACCAGCGTGGGGTCGGTCTACGCTTCGCTGCCCGCCAAAACGACACCCGTTGACGCCGACAAGATCGCGATCGCGGACTCGGCCGCCAGCGGTGCACTCAAGGGCAGTTTGTTATCAGGCTTCAAGACTTGGATCAAGGGCTGGATCACGAGCGCCGATGTTGGCCTGGGCAACGTCAATAACACATCCGACGCCAACAAGCCGATCAGCACGGCGACCCAAGCCGCTTTGGATGCGAAGGCTGCGGTGGCGGCCGTGCGTGAAAAGCTGACTGCAGCCCGGACGTACTACGTGCGCACGGACGGGAACGACAGCAATACGGGGCTGGCTAACACTGTCGGTGGGGCGTTCCTGACCATTCAGAAGGCTATCGACACGGCTGCCGCGCTGGACATCGGAATCCATAGCGTTGCTATTAATGTGGGTGCCGGCACTTTTGGTCCGTTTTCTACAAAAGACCCAGTAGGTAATGGGTCTGTGGCGGTAACAGGTGCTGGCATGGGGTCAACCACAATATCGACCTCAAGCGGGTCCTGCATTACTGCACCGCTTGGTTCGCGAAAATACTCGGTCGCAGGCTTTCGATTGACCACGAGCGATTCTTCGTTTGCTGGAAATGGGTTGAACATTGACATAAATAGCCAATTGTCTGCTGGCGAACTGGACTTCGGTCCTTGCGGTAACTTCCATGTCAATTCATCCGGGATGGTAATCCTGCGTGGATATACGATAAGCGGGCCTGCTCGCGTGCACTGGTACGCTTCAAACGGAGCTACCGTGATTTGTGCCGGATGGACGATTGTTATATCCGGCTCAGTCTCTTTTTCAACGGCGTTTGCCTACGCAGATTGCATGTCCCTGCTTCGCGTGAACGAGAATACTTATTCAGGGACAGCGACGGGGGTGCGGTACCAAATTTTCGCTAACTCGGTGCTGTTTGTTAACGGCGCAGGGGAGTCATATTTGCCAGGAAATTCCGCGGGTTCTAAATTCACAGGAGCACAGTACGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7903ce903165574283980109536d157f846670126a746f17ec8e2bf467b6364
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8138
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50