Protein

Genbank accession
QIG71422.1 [GenBank]
Protein name
pectin lyase fold domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence Phold
Probability 1,00
Protein sequence
MAISITSKNASGNTATVHGKATPGKRVKGTIGSNTYSIVADENGDWSVSFSNLPPGSVEIKAREYDKINIPKVTDMEISLARLKITGTSPQNTIHPTLSSNLYLENGAPVNDRIIVYEYRVFGNTEWIVDGSELSDISGNSTHVFQDVLEDGTYQFRVTAGTVASGFIEIISNTISVTTDKPNEAPQMPPSYTTWVDSEKNGKYGYLGYMYITQGAASGTSVGRVLALNSPKPAVTYSIDDVDFAIDASTGMITLVNSAKAAGTYYVTITASNIAGSQSTIVPITLVPTAGLTRTYFVDSVNGDDSLNNGKTPATPFKTFGKANGIRGADVFSTYITMYKRGTVYDTPTTTTGHALRNYTTIQAYGDPSQPPPHFITTVPSGFAIGASVSGTLTNVILKDLKITGTQRAISLTDGTGSTFLRLQIEKNSQYGNGIYLHGFVNSNIYHCTLVDGIDGDGMYLRKWRQGRVRWCKFGIPTGTGADNLQITSERKSGMEPADVEVSDNIFRHSVLSNALKGNCVIEGASRVLFERNDCEGNYFCLSSLSSLVTVRDNYLRGAILNDNSFGIGTGAIIHTRDQRWIFNRIEGNWFAMALSGYDDPDGGWQRMDYEILYNHTRKNKAFFKQDRPATGFVTDNIAEQNNNNGFSGSGGAATGYTNASGTFVTPDYPAFTKGPNFVNSVTTTDPVVKPTISGTMTAGSTLTVTVPEIAGATSVVQWLINDQKVLNETGLTFIIPAGQVVNPNMPTYRNTPTVSCAVVYTLSNGATVAVPARYDDGYCWRYIQS
Physico‐chemical
properties
protein length:786 AA
molecular weight: 84821,77380 Da
isoelectric point:5,99188
aromaticity:0,09542
hydropathy:-0,23219

Domains

Domains [InterPro]
IPR013783
2–69
IPR013783 cd11304
IPR011050
283–669
IPR011050
QIG71422.1
1 786
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM30
[NCBI] 		2509764 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG71422.1 [NCBI]
Genbank nucleotide accession
MN988521 [NCBI]
CDS location
range 163998 -> 166358
strand -
CDS
ATGGCTATATCAATTACATCTAAAAATGCTTCAGGTAATACTGCAACAGTCCATGGTAAAGCTACTCCTGGGAAGCGCGTTAAGGGTACGATAGGATCAAATACTTATTCTATCGTAGCAGACGAGAATGGGGACTGGTCTGTATCGTTCTCAAATTTACCACCAGGAAGTGTTGAGATTAAAGCTCGTGAATACGACAAAATCAATATTCCTAAAGTTACAGATATGGAGATCTCCTTGGCACGTCTAAAAATTACAGGTACTAGTCCGCAAAATACTATCCACCCTACTCTTAGTTCTAATCTATATCTAGAGAATGGCGCTCCTGTCAATGATAGAATCATAGTTTATGAATATAGAGTTTTCGGTAATACAGAATGGATCGTTGACGGTTCAGAATTGTCAGATATTTCTGGTAATTCTACTCACGTATTCCAAGACGTGTTAGAAGATGGTACTTATCAATTCCGTGTAACTGCTGGTACGGTAGCTAGTGGATTCATCGAAATCATCAGTAATACGATTAGTGTTACTACAGATAAGCCTAATGAAGCTCCTCAGATGCCTCCTTCTTATACGACATGGGTTGATAGTGAGAAGAATGGTAAGTATGGATACCTAGGTTATATGTATATAACTCAAGGTGCTGCATCTGGTACGAGTGTAGGACGTGTCCTTGCATTGAATTCACCTAAACCTGCAGTCACTTATTCAATTGATGATGTTGATTTTGCTATTGATGCAAGTACAGGTATGATCACTCTTGTCAATTCAGCAAAAGCTGCAGGAACTTATTATGTAACGATCACAGCATCTAATATTGCTGGAAGTCAGAGCACAATTGTTCCTATTACTCTTGTACCGACTGCTGGACTAACAAGAACCTACTTCGTTGATAGTGTCAATGGTGACGATAGTCTTAACAATGGTAAGACTCCTGCTACTCCATTCAAGACCTTTGGTAAGGCTAATGGTATTCGAGGAGCAGACGTTTTCAGTACATATATCACGATGTATAAGCGTGGTACTGTTTACGATACTCCTACGACTACAACAGGTCACGCACTTCGCAATTATACAACAATTCAAGCTTATGGTGACCCTTCACAACCACCTCCTCACTTTATAACCACAGTTCCAAGTGGATTTGCAATTGGTGCATCAGTATCTGGTACATTAACTAACGTTATTCTTAAAGATCTGAAGATTACTGGCACACAACGAGCGATCAGTCTTACGGATGGTACAGGAAGTACATTCTTGCGACTCCAGATTGAGAAGAATAGTCAGTACGGTAACGGTATCTACTTACATGGATTCGTTAATAGTAATATCTATCATTGTACACTTGTTGATGGTATTGACGGTGACGGAATGTATCTCCGTAAATGGAGACAAGGTCGAGTTCGTTGGTGTAAGTTTGGTATTCCTACAGGTACTGGAGCAGATAATCTTCAGATCACCTCCGAACGCAAGTCTGGTATGGAACCTGCTGACGTAGAAGTCTCAGACAATATCTTCAGACACTCAGTACTTTCGAATGCTCTTAAAGGTAACTGCGTTATTGAAGGTGCAAGTAGAGTTCTATTCGAACGTAACGACTGTGAAGGTAACTACTTCTGCTTGTCATCACTATCAAGTCTCGTTACCGTACGTGATAACTATCTTCGTGGTGCTATATTGAATGATAACTCATTCGGTATCGGTACTGGTGCAATCATTCATACTCGTGATCAACGATGGATTTTCAATCGTATCGAAGGTAACTGGTTTGCTATGGCACTATCTGGATATGATGACCCAGACGGTGGATGGCAGCGTATGGACTATGAAATCCTTTATAACCATACGCGTAAGAATAAAGCATTCTTCAAGCAAGACCGTCCTGCAACAGGGTTCGTTACAGACAATATCGCTGAACAGAATAACAATAATGGATTCTCAGGAAGTGGTGGAGCAGCTACCGGTTATACAAACGCTAGTGGTACATTCGTCACACCAGACTACCCTGCATTCACGAAGGGTCCTAATTTCGTTAATTCAGTAACGACTACTGATCCTGTAGTTAAACCTACAATCTCTGGTACGATGACTGCAGGATCTACTCTGACAGTGACTGTTCCTGAAATTGCTGGAGCAACATCTGTTGTTCAATGGCTAATTAATGACCAGAAAGTCCTTAATGAAACAGGATTGACGTTCATTATTCCTGCTGGACAAGTTGTTAATCCGAATATGCCAACATATCGTAACACACCAACTGTATCATGTGCTGTAGTTTATACGCTCTCAAATGGAGCAACAGTAGCTGTACCTGCTCGTTATGATGACGGATATTGCTGGAGATACATACAGAGTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
a87cf14667645beb3890e5667aca355243b4c2f6a7a73d763b21eba8ca1469e1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2732
Evidence 0,2732
Download PDB

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank