Protein

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Genbank accession
QYW05871.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARPFEGALNDLLQGVSQQVPRERVAGQCSAQVNMLSDPVTGIRRRPGSLFVSVHDFGPIGEGDALYTQYLERGADGRHLVINTSTGGWWLLDREAKNIVSEGNLSYLLAADRRSIQTTSMGGITYILNTEKRPSATTDNSDKKDPKTTGFYFVKSGAFSKEYDLSVVWSLGSQTVTYTTPDGTTAGDADQSVPEAIARKLVEKLIAVGVDFAVRVGPYIYFELITGTDLKITSTSGSPYVGYSNQSQVNLETDLPARMHPSADGALCAVGQSERALVWYRYSADKGVWLESGDYNSVTAISVDVPYKIVDDNMEQHIMEGRLAGDDLTNPAPTFLEERRITGIGTFQGRLVLLSGAYVCMSATGEPDRFFRSTVSSLDPTDRIDIASGSAQNSVFRQALQFNKDLILLGDSTQAVVPSLQQLLAPDNASVVLTSDLACNAFVAPVTTSQTLMYPAPRSEAFSAVLELVPSQYTSSQYVSQDVTTHIPRYIEGEARFMQSASAANIVLMATTGDNRQVIAHEYHFTSQGKVHQAWHKWVFPYRVASLHFARDRVVLFAADDAGSTDKITISTIDPKQGGVTFDVDRLPHLDAMSRVPITTEGKGIVPIYMRPWVAEGKLTGAVATGARASEEVAIDVDEITWEFTVEPGSTHEEIYLGFRYESLFAPTPPMLKDQNDTLISTAPVRLLRYELTTRNTGEFDVRIVDPSIGLDYSDSTTSLVFGTDSVQPDMALIADLARVPVPCRSNAQSTEMYLSTDGTQDMNILEIEYIIRYNQRRRRV
Physico‐chemical
properties
protein length:781 AA
molecular weight: 85704,22970 Da
isoelectric point:4,93848
aromaticity:0,08451
hydropathy:-0,20487

Domains

Domains [InterPro]
DC_0058
STR
1–781
DC_0058
IPR058003
TTP
9–781
IPR058003
QYW05871.1
1 781
Architecture
STR
STR 1-781
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW05871.1
1 781
Domain Start End Length (AA) Confidence
N-terminal 1 141 141 0,9882
Central domain 142 340 200 0,0608
C-terminal 341 781 440 0,2178
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-141
Central
142-340
C-terminal
341-781

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpP_NS8
[NCBI] 		2862774 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW05871.1 [NCBI]
Genbank nucleotide accession
MZ592921 [NCBI]
CDS location
range 16284 -> 18629
strand +
CDS
ATGGCTCGACCATTTGAGGGTGCATTGAATGACCTGCTGCAAGGTGTGTCGCAACAAGTCCCACGTGAGCGTGTGGCTGGACAGTGCTCTGCGCAAGTTAACATGCTGTCCGACCCAGTAACAGGTATCCGTCGTCGTCCCGGTAGTCTGTTCGTGAGTGTACACGATTTCGGCCCGATTGGTGAGGGTGACGCGCTGTACACGCAGTATCTCGAACGAGGTGCTGATGGACGACACTTAGTAATTAACACCAGCACAGGCGGCTGGTGGCTCTTAGACCGCGAGGCTAAGAACATCGTGAGTGAGGGTAACTTGTCATACCTCCTAGCGGCTGACCGTCGTAGTATCCAGACTACCAGTATGGGTGGTATTACGTACATTCTGAACACTGAGAAACGTCCGTCTGCAACGACTGACAACTCTGACAAGAAAGACCCTAAGACAACAGGTTTCTACTTCGTCAAGAGTGGTGCGTTCAGTAAAGAGTACGACCTGTCCGTAGTGTGGTCGCTCGGTAGCCAAACCGTGACGTACACTACACCTGACGGTACAACAGCAGGTGACGCAGACCAGTCTGTACCAGAAGCAATTGCACGTAAACTGGTTGAGAAGTTAATTGCTGTGGGTGTGGACTTCGCTGTGCGTGTTGGCCCGTACATTTACTTTGAACTAATCACAGGTACTGACCTTAAAATCACAAGTACATCTGGTTCGCCTTACGTTGGCTACTCAAACCAATCACAGGTAAACCTAGAGACTGACCTCCCTGCGCGTATGCACCCATCTGCTGATGGTGCACTGTGTGCTGTAGGTCAATCAGAGCGTGCACTTGTGTGGTATCGTTACAGTGCCGACAAAGGTGTGTGGTTGGAATCTGGTGACTACAACTCTGTGACCGCTATCAGCGTGGATGTGCCCTATAAGATTGTCGATGACAACATGGAGCAACATATCATGGAGGGGCGTCTCGCAGGTGACGACTTAACTAACCCTGCACCGACATTCCTTGAAGAACGCCGCATCACTGGTATCGGTACGTTCCAAGGTCGTCTAGTGCTTCTATCTGGTGCGTACGTCTGTATGAGTGCCACTGGCGAACCAGACCGTTTCTTCCGTTCTACCGTAAGTTCCCTAGACCCTACAGACCGCATTGATATTGCATCCGGTTCAGCTCAGAACTCAGTGTTCCGCCAAGCGTTACAGTTCAACAAGGACTTGATTCTACTTGGTGACAGCACACAGGCGGTAGTACCGTCCCTGCAACAGTTACTTGCACCTGATAACGCAAGCGTGGTGTTGACCTCAGATTTGGCCTGTAATGCGTTTGTAGCACCTGTTACAACCTCGCAGACCCTGATGTACCCTGCACCTCGAAGCGAAGCATTCAGCGCAGTTCTGGAGCTTGTACCGTCACAGTACACCTCGTCTCAGTACGTATCTCAAGACGTTACGACTCACATCCCCCGTTACATTGAGGGTGAGGCTCGTTTCATGCAGAGTGCGAGTGCTGCGAACATCGTACTAATGGCGACTACTGGCGACAACCGTCAGGTGATTGCTCACGAGTACCACTTCACAAGTCAAGGTAAAGTGCACCAAGCATGGCACAAATGGGTGTTCCCGTATCGTGTCGCTAGTTTGCACTTTGCTCGTGACCGTGTTGTGTTGTTTGCCGCAGATGACGCTGGTAGTACCGACAAAATCACTATCTCGACCATCGACCCTAAACAGGGTGGTGTGACGTTTGATGTTGACCGATTACCACACTTAGATGCAATGAGCCGTGTGCCTATTACAACTGAGGGTAAAGGTATCGTGCCAATCTATATGCGTCCTTGGGTAGCTGAGGGCAAGCTCACTGGTGCTGTGGCTACTGGTGCACGTGCCTCTGAGGAAGTGGCTATTGACGTAGACGAAATTACTTGGGAGTTCACTGTTGAGCCGGGTTCAACTCACGAAGAAATCTATCTAGGTTTCCGCTATGAGTCTCTGTTCGCACCTACACCACCAATGCTGAAAGACCAGAACGATACATTAATCAGTACCGCTCCGGTTCGTCTGTTGCGTTACGAGTTAACAACTCGAAATACTGGTGAGTTCGATGTACGCATCGTTGACCCAAGTATCGGATTGGATTACTCAGATAGCACAACTAGCCTTGTGTTTGGTACTGATAGCGTTCAGCCAGACATGGCGTTAATTGCTGACCTAGCGCGTGTCCCTGTACCGTGTCGAAGCAATGCGCAGTCTACTGAAATGTACTTGAGTACTGACGGTACACAGGATATGAACATTCTGGAAATTGAATATATCATTCGTTACAACCAACGCCGACGTCGCGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7cfcbf7d6ace8aeca6fc1d7f87f49da496abe609a49eb9fa2fd940198e1e2b8e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2986
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50