Protein

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Genbank accession
QEA09558.1 [GenBank]
Protein name
VrlC protein
RBP type
TF
Evidence RBPdetect
Probability 0,55
Protein sequence
MEKRANNQGKLKGKVKVPANIPAGTKLVQFYGDKGSYGEATYTGKKTITIEERRRVIAARRVDPLAQTFTLNESRHIGGLELWFINKGKKRVVVQIRETAVGMPSQTVIAESYIEPKDIKIDGTATRITWSPVFCHAGEEYAIVLLTDDPGTAVKIAELGKYDAVNSRWVTSQPYQVGVLLSSSNASTWTPHQNLDLTFRLLAAKFSEVSHVVDLGKVTVNNVSDLIVLTNVEKVAFDTNVEFILTDEEGKENFLSDNLPLALRERLSGELTVKANLKGSKEKSPVLYPGLQLVMGNIGEKGDYVTKSITAGTNTKITITYDALIPGTADVKAYVQKNVDWQLVNLTSGKPIGENWVERTHVLTNFNANETRIKLVLSGTVVYRPKVKNLRIVIT
Physico‐chemical
properties
protein length:395 AA
molecular weight: 43614,48680 Da
isoelectric point:9,28791
aromaticity:0,07089
hydropathy:-0,21544

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Wolbachia phage WO
[NCBI] 		112596 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host wVitA Wolbachia of Nasonia vitripennis
[NCBI] 		7425 Arthropoda > Insecta > Hymenoptera > Pteromalidae > Nasonia >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEA09558.1 [NCBI]
Genbank nucleotide accession
MK976036 [NCBI]
CDS location
range 8052 -> 9239
strand -
CDS
GTGGAAAAAAGAGCTAACAACCAGGGAAAATTAAAGGGAAAGGTGAAAGTACCAGCAAACATTCCAGCAGGTACTAAATTAGTACAGTTTTATGGGGATAAAGGAAGCTATGGAGAGGCAACTTATACTGGTAAAAAAACTATTACCATAGAGGAAAGAAGAAGAGTGATCGCAGCAAGAAGAGTTGATCCATTAGCGCAAACATTTACTTTAAATGAGAGCAGACACATAGGAGGTCTAGAGTTATGGTTTATAAATAAAGGCAAAAAACGTGTTGTTGTGCAGATTAGAGAAACAGCAGTGGGAATGCCCTCGCAGACTGTCATTGCTGAAAGTTATATTGAGCCAAAAGATATAAAGATAGATGGCACAGCAACACGTATAACTTGGTCACCAGTGTTTTGCCATGCAGGAGAGGAGTATGCAATAGTACTGCTTACTGATGATCCTGGTACTGCAGTAAAGATAGCAGAACTTGGCAAATATGATGCAGTAAATAGCCGTTGGGTAACAAGCCAGCCATATCAAGTAGGAGTATTACTGTCATCAAGCAATGCAAGCACCTGGACTCCACATCAAAATTTAGATTTAACGTTTCGACTACTAGCTGCAAAATTTAGTGAAGTTTCTCATGTTGTTGATCTGGGCAAAGTTACTGTAAATAATGTATCAGATTTAATTGTTTTGACGAACGTCGAAAAAGTAGCATTTGATACCAATGTAGAATTTATTCTGACAGATGAAGAAGGAAAAGAAAATTTTCTATCTGATAACTTGCCGCTCGCGCTGCGTGAAAGACTATCTGGAGAGTTAACAGTAAAGGCAAATTTAAAAGGGTCAAAAGAAAAAAGTCCAGTGCTATATCCTGGGTTACAGCTAGTTATGGGTAATATAGGGGAAAAAGGAGATTATGTAACTAAGAGCATTACAGCAGGAACTAACACTAAGATAACAATTACCTATGATGCGCTAATACCTGGCACTGCAGACGTAAAAGCATATGTGCAAAAAAATGTGGATTGGCAATTAGTCAATTTAACATCAGGAAAACCAATAGGGGAAAACTGGGTGGAGAGAACTCATGTACTGACAAACTTTAATGCTAATGAGACAAGGATAAAATTGGTTTTAAGTGGAACGGTTGTTTATCGGCCAAAGGTAAAAAACTTGCGGATTGTTATAACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c1dab292599065c2cda6a4f203dd3c8e284f99b02c5271dc004e5bf2a4e862b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9007
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
WO phage from Wolbachia strain wRi_KL Mohanty,S. and Singhal,K. 2017-10-05 — GenBank