Protein

View in Explore
Genbank accession
QBX27710.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MVIIERVYFDGKELTQFITVTSDFHLWQGADFDPQLLENEILSGSEFNYTRFNAKTIPVPFYNTSGTFQEYNQLMAILNVTEPKELRFSSLPNITFQAIPSGNIDYDKLTRRNGKGTINFIIADGLAHSKTTRTFEFSKNEQGTLEAEIINEGSEEVAVSYEIKLKKESGFVGIVSEYGAMQFGKYDESDGYMDRKNVTVVSNQKGDFANWTDGTKNYENTNKIITTQMTADTSYGGRLGLLPNSFTTSGTSGAYQYGAVKEYTLSNPISQWYIWARAWFETGLMGQTGAWCLTVLDESNHLIAGMAIEKDDTVGNTANVRFLMGDGSGGSRTVKTISFTPSYWVPPNPYGTESRDQNRNMFDLVKEKDRVQFFWYGGYYPYYDSRLANVKAKKIQFFVGQYAGRNTTDRKVTHHYLNDFTFQELHVDYWKDVPNRYSSGSVINIDGEKGQIKVNNQIRLDDEVLGTTYFKVPPGKTKVQLILSSFAEITSATATIQEVYI
Physico‐chemical
properties
protein length:501 AA
molecular weight: 56686,62870 Da
isoelectric point:5,32231
aromaticity:0,13174
hydropathy:-0,46507

Domains

Domains [InterPro]
DC_0420
STR
2–501
DC_0420
G3DSA:2.40.30.200
ATT
4–128
G3DSA:2.40.30.200
IPR006520
Unmapped
9–128
IPR006520
IPR008841
STR
35–121
IPR008841
QBX27710.1
1 501
Architecture
ATT
STR
ATT 2-128 | STR 129-501
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX27710.1
1 501
Domain Start End Length (AA) Confidence
N-terminal 1 187 187 0,8941
Central domain 188 386 200 0,1417
C-terminal 387 501 114 0,5335
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-187
Central
188-386
C-terminal
387-501

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan414
[NCBI] 		2548155 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pasteurianus
[NCBI] 		197614 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27710.1 [NCBI]
Genbank nucleotide accession
MK448931.1 [NCBI]
CDS location
range 27323 -> 28828
strand +
CDS
GTGGTAATTATCGAAAGAGTATATTTTGACGGAAAAGAATTGACACAATTTATTACCGTCACATCTGATTTTCATTTATGGCAAGGCGCTGATTTCGACCCGCAACTTTTAGAAAATGAAATTCTAAGTGGTTCTGAATTCAATTACACACGTTTCAACGCTAAAACAATTCCAGTTCCGTTTTACAATACGTCTGGAACATTTCAAGAATACAACCAGTTAATGGCTATTCTTAATGTTACCGAACCTAAAGAGTTGCGTTTCAGCAGTCTGCCAAACATAACGTTTCAAGCTATTCCGAGCGGAAATATTGATTATGATAAGTTAACTCGCCGAAACGGCAAAGGCACGATTAATTTTATTATCGCAGACGGCTTAGCGCACTCTAAAACAACTCGTACATTCGAATTCTCTAAAAATGAACAAGGTACGCTTGAAGCTGAAATCATCAACGAAGGAAGCGAAGAGGTCGCTGTTAGCTACGAAATCAAGCTCAAAAAAGAGTCTGGTTTCGTTGGCATTGTTAGTGAGTATGGCGCTATGCAATTTGGTAAGTACGATGAATCAGATGGTTATATGGACAGAAAGAACGTGACGGTTGTTAGTAATCAAAAAGGCGATTTTGCTAATTGGACTGACGGCACTAAGAATTATGAAAATACAAACAAAATCATTACAACTCAAATGACCGCTGATACTTCGTACGGCGGTCGTCTTGGTTTGTTGCCAAACTCATTTACAACAAGCGGAACTTCTGGCGCTTATCAGTATGGAGCGGTTAAGGAATACACGCTAAGTAATCCTATCTCTCAATGGTATATCTGGGCTAGAGCTTGGTTTGAAACTGGATTGATGGGGCAAACTGGCGCTTGGTGCTTAACGGTGCTAGATGAAAGTAATCATCTAATCGCTGGCATGGCAATTGAGAAAGACGACACAGTTGGTAATACTGCAAATGTCCGTTTCTTAATGGGTGACGGTTCGGGTGGCAGTCGTACGGTTAAGACGATTTCATTCACGCCGTCATATTGGGTGCCACCAAACCCATACGGAACAGAAAGTCGCGACCAAAACCGCAACATGTTCGACTTAGTCAAAGAGAAAGACCGTGTGCAATTTTTCTGGTACGGTGGCTATTATCCGTATTATGATTCTCGTTTAGCAAATGTCAAAGCGAAGAAAATTCAGTTTTTCGTCGGACAGTATGCAGGACGAAACACGACAGACAGAAAAGTGACACATCATTATTTAAACGATTTTACTTTTCAAGAATTGCATGTTGATTACTGGAAAGACGTTCCTAATCGCTATTCAAGCGGTTCAGTCATTAATATTGACGGTGAGAAAGGGCAAATCAAAGTCAATAATCAAATTCGTTTAGACGACGAAGTTTTGGGAACAACTTATTTTAAAGTGCCACCAGGAAAAACAAAGGTGCAGTTAATACTTTCTAGCTTTGCGGAAATTACTTCTGCCACAGCTACTATACAGGAGGTTTACATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fb12517177b0fa6f94ca590dd4d49e5dc51b9424f2c01437633eb8356c1bc82d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8360
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank