Protein

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Genbank accession
QGZ17772.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPLIKLNATQGLTGTLPAVSGANLTNIDGGKVLQVVQGTLSTSVTTNSSSFSDVGLSATITPSSSSNKILILVDLNGVESRDNRTWLDAKLLRGSTDIVANFGGRAGYGQKYGYTDSDYHRGVGAVTCSFLDSPSTTSATTYKIQYASNVNVQSIGVCSMNCSSFITLMEVSA
Physico‐chemical
properties
protein length:173 AA
molecular weight: 18033,99770 Da
isoelectric point:6,52980
aromaticity:0,06358
hydropathy:0,03584

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC026P
[NCBI] 		2686456 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17772.1 [NCBI]
Genbank nucleotide accession
MN698240.1 [NCBI]
CDS location
range 28613 -> 29134
strand +
CDS
ATGCCATTAATAAAATTAAACGCAACACAAGGACTTACAGGAACACTACCAGCAGTTAGTGGTGCTAACTTAACTAATATTGATGGTGGAAAGGTTTTGCAAGTTGTTCAAGGAACATTATCAACTAGTGTTACAACAAATTCAAGTTCGTTTTCAGATGTTGGTTTAAGTGCAACAATAACACCATCATCTTCTTCAAATAAAATATTAATTTTAGTTGATTTAAATGGTGTTGAAAGCAGAGATAACAGAACATGGTTAGATGCAAAACTTTTAAGAGGTTCAACTGATATTGTTGCAAACTTTGGTGGTAGAGCAGGATATGGTCAAAAATATGGCTATACTGATAGTGATTATCATAGAGGTGTAGGAGCTGTAACTTGTAGTTTTTTAGATTCTCCATCAACAACATCTGCAACAACTTATAAAATTCAATATGCTAGTAATGTAAATGTTCAATCTATTGGAGTATGTTCAATGAATTGTAGCTCTTTTATTACTTTAATGGAGGTATCAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2d0c947fbaf26b4845337a1e496a9799757892cae8f87a984643ed9a8f891700
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8404
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank