Protein

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Genbank accession
WBM89858.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAIRTYKVTLDSNNTIAPEPVYLRQGDKTGAVVIDATLMDNGSPVSLSGLTPMFKANTADGKAVIADGGGFSYVNAAGGELTYQVPNALASVPGKIKNAYFSLSDSSGVQSTFSIPFTVLPAADVTLPGALDYITIVDGTNSDIRAIINSYNVVPNGRFQEGISGSVVPSVAGVNISQIKVDGAIFARAVSPSGTVNNQGLGMIVPRLNKAGEAMIGSGTYRVSFRLFSWANQTLKVTIIPRDASENRLSGFDVGSFSVSSDKNVRINNSVRLDVSGSEKDFLIMVWNADGHGVNFGATDFTMIKEDEVVTGSDLESGYIESANRDNLFRNSFFTDGTTPWQKGGTDVDFRNELYADKKWLHVWTGGHTGQSVSYLGADGTKLVNGVRNTGVRGSLIIKFNAASVIDIHAIFRDATGTVLDDVIVNTVKSRDLAVPTKVNFFIPRIGRPDLSTVLITFKDHYSAAFDFNVTEIVGYPIAFEKPDRLSMNVVDDPTLKTGSAYFRTSNGGAYSPVMLLNHRWIKYSCPAASKQPTSRLEYLFNNEETTNDDFRTYNVLVECDVLVDTTGIYTVNATSYDLNNTKVRDYVITALPLTAGVINHIDFILPHFQPDEFNYGFGLCSTSTGDLSYSVSNINIRADVGIDNQGEHAFTSGTNLPVIKIDGTFPTQKGDKTTVTVRILKNGIAKNYFAKLSIQGDSSATYDKKNYKLKLYSDPDCTVKAKFKPSPSWIDEGTLVLKANWIDATHALNIVSAKLFAAITQNRANVNPNLLNASMLGQIQGTPSLLYTNSSFHGLYTINSGKDENLFGFGDVPKNAGVLEAQNHFTDKGFGKPTIVITDDITANPDADMEVQVGTTTAEFQAATNRLAQFVSQSDDATFHDQFSQYLDLESVIDFLIFFQVAECSDSYIKNIEYTTYDGKIWLPIPYDLDSTWGLNWDGKTIFDPEMDMLNTGLTSKNFDNFKLNTLLNRTLKAFKPEIKARYAQLRTSVLAPDKVTSMFEEFMDGVGTNAYAKELSRWPDIPSTFFDFKTIRKNVITRFRISDYIFKNL
Physico‐chemical
properties
protein length:1051 AA
molecular weight: 115245,21530 Da
isoelectric point:5,30344
aromaticity:0,10466
hydropathy:-0,16879

Domains

Domains [InterPro]
DC_1249
STR
1–407
DC_1249 DC_1578
G3DSA:2.60.40.3350
ATT
3–123
G3DSA:2.60.40.3350 IPR014867
IPR018913
ATT
10–140
IPR018913
WBM89858.1
1 1051
Architecture
ATT
STR
STR
ATT 1-140 | STR 141-407 | STR 647-1041 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WBM89858.1
1 1051
Domain Start End Length (AA) Confidence
N-terminal 1 687 687 0,6863
Central domain 688 900 214 0,5264
C-terminal 901 1051 150 0,1301
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-687
Central
688-900
C-terminal
901-1051

Taxonomy

  Name Taxonomy ID Lineage
Phage Lacticaseibacillus phage R3.3
[NCBI] 		3016942 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lacticaseibacillus casei
[NCBI] 		1582 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBM89858.1 [NCBI]
Genbank nucleotide accession
OP807345 [NCBI]
CDS location
range 7001 -> 10156
strand -
CDS
ATGGCAATCAGAACTTACAAAGTAACACTTGATTCAAATAATACCATCGCGCCTGAGCCTGTATATTTGCGGCAAGGGGATAAGACAGGCGCCGTGGTGATTGATGCCACACTGATGGACAATGGCTCTCCAGTGTCGCTTAGCGGCCTTACGCCGATGTTCAAAGCTAATACCGCCGATGGTAAGGCAGTAATCGCTGACGGCGGAGGGTTTTCCTATGTAAATGCGGCTGGCGGAGAACTGACCTACCAAGTCCCGAATGCTCTTGCAAGCGTTCCGGGTAAGATTAAAAATGCCTATTTTAGTCTAAGCGATTCTAGTGGGGTTCAGTCAACATTCAGCATTCCCTTTACCGTCTTGCCAGCAGCTGATGTTACTCTGCCCGGTGCCCTTGACTATATTACAATTGTTGATGGAACAAATAGTGACATTCGAGCAATTATCAATTCGTACAATGTAGTACCTAATGGCAGGTTTCAGGAGGGAATCAGTGGTAGCGTAGTTCCGTCAGTCGCTGGGGTTAACATATCCCAAATAAAAGTTGATGGTGCTATTTTTGCGAGAGCAGTATCTCCATCAGGGACGGTCAACAACCAAGGGCTGGGAATGATTGTTCCTCGTTTAAATAAAGCCGGCGAGGCAATGATCGGATCGGGAACATATCGTGTTAGCTTTCGACTGTTCTCGTGGGCAAATCAGACTCTCAAGGTAACAATAATCCCACGAGATGCTTCAGAAAATCGGCTTTCGGGCTTTGATGTTGGTTCGTTTTCAGTGTCAAGCGACAAAAACGTGCGAATTAATAATTCCGTCAGGCTAGATGTTTCTGGAAGTGAAAAAGACTTTCTGATAATGGTGTGGAACGCGGATGGCCACGGCGTAAACTTTGGAGCAACCGACTTCACAATGATTAAAGAAGATGAGGTTGTCACTGGCTCCGACCTAGAATCTGGATATATCGAGTCTGCAAACCGTGACAATCTTTTTAGAAACTCGTTCTTCACGGACGGCACAACTCCTTGGCAGAAGGGCGGTACGGATGTAGATTTCAGAAATGAACTCTACGCGGACAAAAAATGGCTTCACGTGTGGACTGGAGGACACACTGGACAAAGCGTGAGCTATTTAGGTGCGGATGGTACCAAACTAGTAAACGGTGTCCGTAATACGGGTGTTCGCGGATCACTCATCATCAAGTTCAACGCTGCGAGTGTCATTGATATTCATGCTATTTTCCGTGATGCCACCGGCACCGTACTTGATGATGTTATCGTCAATACGGTAAAGTCGCGTGACTTGGCGGTTCCAACAAAGGTTAATTTCTTCATACCGCGAATTGGACGCCCCGATCTTTCGACAGTCCTCATCACTTTTAAGGATCATTACTCAGCCGCTTTTGACTTCAACGTCACCGAAATTGTCGGCTACCCGATCGCTTTTGAAAAACCTGACCGGCTATCTATGAACGTAGTTGACGATCCAACGCTAAAAACTGGATCGGCCTACTTCCGTACATCAAATGGCGGTGCATACTCTCCAGTAATGTTGCTAAACCATCGCTGGATAAAATATTCGTGTCCAGCCGCGTCTAAACAGCCTACATCTCGTCTCGAATACCTGTTCAATAACGAAGAGACCACAAATGATGACTTCCGTACTTACAATGTTTTGGTTGAATGTGATGTGTTGGTTGACACAACAGGAATTTACACCGTGAACGCTACCAGCTACGATTTAAATAACACCAAGGTTCGAGATTATGTCATTACCGCTCTACCACTAACAGCTGGCGTTATTAACCATATTGACTTCATATTGCCGCATTTCCAGCCTGATGAATTCAACTATGGTTTCGGACTTTGCTCAACATCAACGGGTGACTTGTCTTATTCAGTATCAAACATTAACATTCGTGCTGATGTCGGTATTGATAACCAAGGGGAACACGCCTTCACTAGCGGAACAAATCTTCCGGTTATCAAAATCGACGGTACTTTCCCAACTCAAAAAGGCGATAAAACAACAGTAACGGTTAGAATTCTCAAAAATGGCATTGCCAAAAATTACTTCGCTAAGTTGTCTATTCAGGGCGACTCCTCGGCCACTTACGACAAGAAGAACTACAAGCTAAAGCTATACAGCGACCCTGATTGCACTGTAAAGGCCAAGTTCAAGCCGTCACCAAGCTGGATCGATGAGGGAACGCTTGTCCTAAAGGCCAACTGGATTGACGCTACTCATGCGCTTAATATCGTTAGCGCCAAGCTGTTTGCCGCAATCACACAGAACCGTGCGAACGTGAACCCGAATTTGTTAAACGCAAGCATGTTAGGACAGATTCAAGGCACTCCTTCGCTTCTGTATACAAACAGCTCATTTCACGGACTGTACACAATCAATTCAGGCAAGGACGAAAACCTGTTTGGTTTTGGTGACGTACCCAAAAATGCCGGTGTTCTGGAAGCACAAAATCATTTTACGGATAAAGGGTTCGGCAAGCCAACCATTGTCATCACTGATGACATCACAGCCAATCCTGATGCAGATATGGAAGTGCAAGTCGGCACGACAACTGCTGAATTTCAAGCGGCTACAAACCGCCTTGCGCAGTTCGTTTCACAGTCGGATGATGCTACGTTCCATGACCAGTTTAGCCAGTATCTCGACCTTGAATCAGTGATCGACTTTCTCATCTTCTTCCAGGTTGCGGAATGCAGTGACTCTTATATCAAGAACATTGAGTACACCACATACGACGGCAAAATCTGGCTGCCAATTCCTTATGACCTTGATTCGACTTGGGGCTTGAATTGGGACGGCAAGACAATATTCGATCCTGAAATGGATATGCTGAACACCGGTCTTACCAGCAAGAATTTTGATAACTTCAAACTGAACACGCTTCTGAATCGAACCCTCAAAGCATTCAAGCCAGAAATCAAGGCGCGGTACGCTCAACTAAGAACATCAGTCCTGGCGCCAGACAAAGTTACCAGTATGTTTGAAGAGTTCATGGATGGTGTTGGCACTAACGCTTACGCTAAGGAGCTCTCACGATGGCCTGACATTCCTTCAACGTTCTTCGATTTCAAAACAATTAGAAAGAACGTTATCACACGTTTTCGCATATCTGATTACATTTTCAAAAATTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d1acc602188d02f64d469c94b564721fa0975e7d5f50cc63f79149b0e37dd8d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2793
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50