Protein

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Genbank accession

ATS93745.1 [GenBank]

Protein name

tail fiber protein Ig-domain containing

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,89

Protein sequence

MAKPKDPIYVWAAADVNLPGTGRPNKSKPIDDLLAKGYDKGQKPAAEEFNYILNMSSAWVNWIVNEKFPELEAEIARLLAELENRINQQLAVIRQDIAQLKQDVADLRRYVDQKVQELKQEIQGVRNDLNKLRQDFDAAIAQVNGRIDDLEPRLVPIGAVIPWPGATVPDGWLECNGQVFNTGQNPKLYSVLGRNVVPDYRGLFLRGWAHGSEANDPDAGRDLGSIQEDALQEIQGEFVIDDWGWVDGKLFKVIGGRSSGWESQGGGLAVEFKAGNVARTSTETRPRNVAVMYIIKTDQAQSSGGNSPTAIVVSPDTITNRIGYAVKATASVLPASISGQYPVSWSTQNAAVATVDGSGNIRLVGPGETNIIASISTGMNVVIRVTSYSVLTSISIADPGQIPVTESKMLVVTKSPSSANEPLQFLSNNSGVAAVNDAGYVIGVSAGSATITVRGTLSGVSSTRAVTIIPEQVEESVQDNRLGAVGSYIPTSNEMSWTFQAPQGCALTGIIVQEAESNSGDNIGGIYYKPIQKKVNGVWVTITG

Physico‐chemical properties

protein length:	544 AA
molecular weight:	58308,87660 Da
isoelectric point:	4,95132
aromaticity:	0,06618
hydropathy:	-0,18732

Domains

Domains [InterPro]

DC_0413
STR
1–520

DC_0413

SSF58113
STR
41–156

SSF58113 IPR011083 G3DSA:2.60.40.1080 G3DSA:2.60.40.1080

Coil
Unmapped
68–142

Coil SSF88874 IPR008964 IPR003343

G3DSA:1.20.58.130
Unmapped
88–154

G3DSA:1.20.58.130 IPR037053 IPR003343 IPR008964

ATS93745.1

1 544

Architecture

STR

ATT

STR

STR 1-154 | ATT 155-206 | STR 207-520 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0413	STR	DC_0413	1	520	Novel HMM	DC_0413	Central	Low	Positional only	85 proteins / 85 hits
SSF58113	STR	SSF58113	41	156	Merged direct domain	SSF58113	Central	Low	Positional only	3 proteins / 3 hits
Coil	Unmapped	-	68	142	Coils	Coil	-	-	-	-
G3DSA:1.20.58.130	Unmapped	-	88	154	Gene3D	None	-	-	-	-
SSF88874	STR	SSF88874	154	296	Merged direct domain	SSF88874	Central	Low	Positional only	109 proteins / 109 hits
IPR037053	ATT	IPR037053	155	206	Merged direct domain	Phage tail collar domain superfamily	N-terminal	Low	Positional only	37 proteins / 37 hits
IPR011083	ATT	DC_0235	158	204	InterPro cluster	Phage tail collar domain	C-terminal	Medium	Text match	1051 proteins / 1051 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	307	386	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR008964	RBD	IPR008964	309	385	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits
IPR003343	STR	DC_0008	309	373	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
G3DSA:2.60.40.1080	STR	G3DSA:2.60.40.1080	387	469	Merged direct domain	G3DSA:2.60.40.1080	Central	Low	Positional only	18 proteins / 18 hits
IPR003343	STR	DC_0008	402	453	InterPro cluster	Bacterial Ig-like domain, group 2	C-terminal	Medium	Text match	304 proteins / 473 hits
IPR008964	RBD	IPR008964	407	454	Merged direct domain	Invasin/intimin cell-adhesion fragments	C-terminal	Low	Positional only	2 proteins / 2 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Pectobacterium phage DU_PP_IV [NCBI]	2041491	No lineage information
Host	Pectobacterium sp. [NCBI]	1913084	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

ATS93745.1 [NCBI]

Genbank nucleotide accession

MF979563.1 [NCBI]

CDS location

range 25618 -> 27252
strand +

CDS

ATGGCTAAACCAAAGGACCCTATTTACGTTTGGGCCGCTGCTGACGTAAACCTTCCAGGCACGGGCCGTCCTAACAAATCAAAGCCTATTGACGACTTGCTCGCCAAAGGTTATGATAAAGGGCAAAAGCCAGCGGCAGAAGAGTTCAACTATATCCTGAATATGTCCTCTGCTTGGGTTAACTGGATCGTCAATGAGAAGTTTCCAGAGCTTGAGGCAGAAATCGCCCGACTCTTGGCAGAACTTGAAAACCGCATCAACCAGCAGTTGGCTGTTATCCGTCAGGATATTGCCCAACTGAAGCAAGATGTCGCAGACCTTCGTCGATATGTCGATCAGAAGGTTCAGGAACTGAAGCAAGAGATCCAAGGTGTCCGAAACGATCTTAACAAACTGCGTCAAGACTTTGATGCTGCGATTGCTCAAGTCAACGGACGAATTGATGACCTTGAACCACGCCTTGTTCCAATCGGTGCCGTTATCCCTTGGCCTGGGGCGACAGTCCCTGACGGCTGGCTGGAGTGTAATGGTCAGGTGTTTAATACCGGGCAGAACCCCAAACTGTATAGCGTTCTGGGCCGAAACGTTGTCCCTGACTACCGTGGTCTATTCCTACGTGGCTGGGCACACGGTTCTGAAGCTAACGACCCAGATGCAGGCCGTGATCTTGGCTCAATACAGGAGGATGCGCTTCAGGAAATTCAGGGGGAGTTTGTCATTGATGACTGGGGATGGGTCGATGGGAAACTGTTTAAAGTTATCGGTGGCCGAAGCAGCGGATGGGAATCTCAGGGCGGAGGTCTGGCTGTCGAGTTTAAAGCGGGTAATGTTGCCCGGACATCAACAGAAACTCGTCCTCGTAACGTCGCGGTGATGTATATCATCAAGACTGACCAGGCGCAGTCCTCCGGAGGTAACTCACCAACGGCGATCGTCGTCTCCCCAGATACAATCACCAACCGTATAGGATACGCCGTCAAAGCGACTGCAAGTGTACTCCCTGCTTCCATCTCAGGTCAATACCCGGTATCATGGTCTACTCAAAACGCTGCGGTGGCAACCGTGGATGGCTCTGGCAACATCCGCCTTGTAGGGCCGGGTGAAACCAACATCATCGCTTCCATCTCTACCGGGATGAACGTGGTGATCCGTGTGACGAGCTACTCTGTTCTGACCAGCATCTCCATTGCTGATCCGGGTCAGATTCCAGTCACCGAATCGAAGATGCTTGTTGTTACTAAAAGCCCAAGTAGTGCGAACGAGCCTCTGCAATTCCTGTCAAATAACTCCGGTGTTGCGGCCGTGAACGACGCAGGTTACGTAATTGGTGTCAGTGCTGGTTCTGCAACCATCACGGTACGAGGAACGTTGTCTGGAGTCTCCAGCACTCGTGCAGTAACGATTATCCCTGAGCAGGTTGAAGAGAGCGTACAGGATAACCGTCTCGGCGCGGTTGGTTCTTACATCCCAACAAGCAACGAAATGAGTTGGACTTTCCAAGCCCCCCAAGGTTGTGCTCTGACAGGTATCATCGTACAAGAGGCCGAATCAAATTCCGGGGACAACATCGGTGGTATTTATTACAAGCCGATCCAGAAGAAAGTTAACGGCGTCTGGGTCACGATCACGGGGTAA

Genome Context

Tertiary structure

PDB ID

e451e55c88ec798fe96452f664b1d8c47ff59eda80ca6162a673e5f46b215ae0

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,8232

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Complete genome sequence of bacteriophage (DU_PP_IV) infecting Pectobacterium spp.	Park,T.-H.	2017-11-22	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature