Protein

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Genbank accession
CAL9961828.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MATERKLRRGTEVEHQTFTGASGELTAVTDKPGLRLHDGVTPGGHTIPTTSRESDAAPLGVISEGSTELRTLGERFSEAVNIKDFGVVGDGITDDSDALQAALQYSYDNQRNLIGGNYTVRTTKTIYIGNYPDSTESITLDFGGIRLRPDDSVNIVVDSGRHINGVWQTTWGEPNETYMSFMTKFEGLQIEGSSDAAKDGRTGIRFKDWHYGCEIKRVATRNFETGHHNKNCFSAEWDSCTSFNTNANNRTGTGFIFEAANNLMTVKRCWVGNMGTGYELRGGITAFHMNNCGIEGAFTGVRCTNYVYDLAIRDCYVEGIRDVGFDLQDNVLACTLDSNYMNFGLSHSTGAYILDYKPGPNTNIRYLATNEEVLASGVTFEDILFKDTSTTFGYNKVYVERPAKQGNLSVDSFAAPAGIPEDVDWNEVQIHPNVKAEIVNGLAKGQYAGRMTTGTASSTGFEFIDLSDTTCELETRYTASNTGKLHVALRASASGIWYITGELVGRGSSDLEFYEYLPANRWREVSPGSGTTIVMPGLAFHSGDAANYTFVVNNEVYEPNDAINTPKSFRVDMATNTVTVDSATPFLPGDVIYMTNNGGGLVPSDRVSAAIVDGYVRLTVNPNSGNNVTAVVGEIRLL
Physico‐chemical
properties
protein length:638 AA
molecular weight: 69502,18990 Da
isoelectric point:4,90051
aromaticity:0,09561
hydropathy:-0,33370

Domains

Domains [InterPro]
G3DSA:2.10.10.30
ATT
1–51
G3DSA:2.10.10.30 IPR012334
IPR041352
ATT
6–41
IPR041352 IPR011050
DC_0579
STR
12–636
DC_0579
IPR024535
ENZ
80–128
IPR024535
CAL9961828.1
1 638
Architecture
ATT
STR
ATT 1-51 | STR 52-636 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAL9961828.1
1 638
Domain Start End Length (AA) Confidence
N-terminal 1 96 96 0,9845
Central domain 97 400 305 0,9871
C-terminal 401 638 237 0,8390
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-96
Central
97-400
C-terminal
401-638

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D69
[NCBI] 		3105312 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9961828.1 [NCBI]
Genbank nucleotide accession
OZ195729.1 [NCBI]
CDS location
range 48924 -> 50840
strand +
CDS
ATGGCAACTGAAAGAAAACTAAGACGCGGTACTGAGGTTGAACACCAGACCTTTACAGGTGCGTCAGGCGAGCTAACGGCCGTTACGGATAAGCCAGGCCTTCGTCTACACGACGGTGTGACTCCAGGTGGTCACACTATCCCCACTACTAGTAGGGAGAGTGATGCTGCACCACTAGGTGTAATTTCGGAAGGTTCTACTGAACTACGTACTCTAGGTGAGCGCTTCTCTGAGGCAGTAAACATTAAAGATTTCGGCGTAGTAGGCGACGGAATTACAGATGATTCGGATGCACTTCAAGCAGCGCTACAGTACTCGTATGATAACCAGCGTAACCTTATTGGCGGTAATTATACAGTAAGAACTACCAAGACTATTTATATTGGTAATTACCCAGATTCTACGGAATCTATTACCCTAGACTTCGGTGGTATTAGACTTCGTCCAGATGACTCAGTAAATATCGTCGTTGATAGTGGACGTCACATCAACGGTGTATGGCAGACTACTTGGGGCGAGCCCAACGAGACGTATATGTCATTCATGACTAAGTTTGAAGGGTTACAGATCGAAGGATCATCTGACGCAGCTAAAGATGGGCGTACAGGTATTCGTTTCAAAGACTGGCACTATGGCTGTGAGATTAAGCGAGTAGCTACTCGTAACTTCGAAACTGGTCACCACAACAAGAACTGTTTCAGTGCAGAATGGGATTCATGTACTAGCTTTAACACTAACGCCAACAATCGAACAGGTACAGGCTTCATTTTTGAAGCGGCTAACAACCTAATGACTGTCAAGCGATGCTGGGTAGGTAACATGGGTACGGGATATGAGCTTCGCGGTGGTATTACCGCATTCCACATGAATAACTGTGGTATTGAAGGTGCATTCACGGGCGTCCGCTGTACTAATTATGTATACGATCTGGCAATCAGAGATTGTTACGTAGAAGGTATCAGGGACGTTGGTTTTGACCTTCAAGACAATGTATTAGCATGTACGCTTGATAGTAACTATATGAACTTCGGTCTGTCTCACTCTACTGGCGCTTATATCTTAGATTACAAACCAGGACCGAATACTAACATCCGTTATCTAGCTACTAACGAAGAGGTTCTTGCAAGCGGAGTTACTTTTGAAGACATCCTGTTCAAGGATACTAGTACAACATTCGGTTACAATAAAGTCTATGTAGAGCGTCCAGCTAAGCAAGGAAACCTGTCTGTAGATTCATTTGCAGCTCCTGCAGGTATTCCTGAAGATGTCGATTGGAACGAAGTTCAGATTCACCCTAATGTCAAGGCCGAGATAGTTAACGGTTTAGCTAAAGGTCAATACGCAGGGCGTATGACTACTGGTACTGCGTCGTCTACTGGATTCGAATTCATTGATCTAAGTGATACTACGTGTGAGTTAGAAACTAGATATACTGCTAGTAATACTGGTAAATTGCACGTTGCTCTGAGAGCTTCTGCCTCAGGAATCTGGTATATCACAGGTGAGCTAGTAGGTAGGGGTAGCAGTGATTTAGAGTTCTACGAATACCTGCCTGCCAATAGATGGAGAGAAGTGTCTCCGGGTAGTGGTACCACTATAGTTATGCCAGGACTGGCATTTCACTCTGGTGACGCAGCGAACTATACCTTCGTAGTTAATAATGAAGTATACGAGCCTAATGATGCCATTAATACTCCAAAGTCATTTAGAGTAGATATGGCTACAAATACGGTAACAGTGGATAGTGCTACACCCTTCCTACCCGGAGACGTCATTTACATGACTAATAATGGAGGTGGATTGGTACCGTCAGACCGAGTATCTGCAGCTATAGTGGATGGCTACGTCAGACTTACAGTGAACCCTAACTCAGGTAACAATGTAACTGCAGTGGTCGGCGAGATACGTCTTCTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f02d62dfe4ec7ae5a8f5021ebe18eeced8a319889a333d5a611f7d0d3e735d8b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5922
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50