Protein

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Genbank accession
YP_009218737.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,79
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MYTKNDGTQVVDGFIYKDGPDAVPRRSGIRINCYTPNKETGNGEFSGEFIFNENGSFILPPGGTIYQEGITPGLYANVILSSAAAGTTAYLRKFRGGGPDTIWHEAVRSNTYALGTGATYSNEVMTLDDTGNLSIKGLPSASTNVYLDSNENSVIWFRHSGGAEKGVVWAEANGSLNIRANMGGSCTWNYQNGMIHQSTYAVTGTERGLIRGTVEGGGWDQWRDRAAAVSVDVPAVNVGAYSIWKATSWNNTYVAAMDVHMPNFTPSATRVRLVLQSSVAFYFDGDGSFSTSTGNVTAGANGYFNDVYIRSDEKLKSNFNKIENALDKVELLNGLTYDKASYIGGETVKREAGLIAQELQKVLPEAVSVGKDTKENEVLVISPTATIALLVEAIKELREEVRELKSRQ
Physico‐chemical
properties
protein length:408 AA
molecular weight: 44192,67580 Da
isoelectric point:5,25536
aromaticity:0,09559
hydropathy:-0,31005

Domains

Domains [InterPro]
DC_1202
STR
3–408
DC_1202
IPR030392
CHP
311–367
IPR030392 Coil
IPR030392
CHP
311–408
IPR030392
YP_009218737.1
1 408
Architecture
STR
STR 3-408
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009218737.1
1 408
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1575
Central domain 11 205 196 0,3452
C-terminal 206 408 202 0,9309
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-205
C-terminal
206-408

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage IME-CF2
[NCBI] 		1673887 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus imecf2
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009218737.1 [NCBI]
Genbank nucleotide accession
NC_029013 [NCBI]
CDS location
range 125210 -> 126436
strand -
CDS
GTGTATACGAAAAATGATGGTACTCAGGTTGTTGATGGTTTTATCTATAAAGACGGACCTGATGCAGTTCCTCGCCGTTCCGGTATTCGCATTAACTGTTATACACCGAATAAAGAAACTGGTAATGGGGAGTTTTCCGGTGAATTTATTTTCAACGAAAATGGTAGCTTTATTCTTCCTCCTGGCGGCACAATATATCAGGAAGGTATAACACCAGGTCTTTACGCAAACGTTATATTAAGTTCAGCCGCCGCTGGTACTACTGCGTATCTTCGTAAATTCCGTGGTGGTGGCCCTGATACGATATGGCATGAGGCTGTTCGTTCTAACACATACGCTCTGGGAACTGGCGCGACATATTCAAACGAAGTAATGACTCTTGATGATACTGGTAATCTGTCTATCAAAGGGCTTCCATCAGCATCAACTAACGTTTACCTAGATAGTAATGAAAATTCTGTCATTTGGTTTAGACATTCCGGCGGTGCGGAAAAAGGCGTTGTGTGGGCAGAAGCAAATGGTTCTCTAAACATACGAGCAAACATGGGTGGTTCTTGTACATGGAATTATCAAAATGGCATGATACATCAAAGTACATACGCAGTAACAGGAACTGAACGTGGTCTTATCCGTGGTACTGTTGAAGGTGGTGGTTGGGATCAGTGGCGTGACCGTGCTGCTGCGGTATCCGTTGATGTTCCTGCCGTAAACGTAGGTGCATATAGTATCTGGAAAGCAACTTCATGGAATAACACCTATGTTGCTGCGATGGATGTTCATATGCCTAACTTTACGCCTAGTGCAACCCGTGTTCGTCTGGTTCTGCAAAGTTCTGTTGCGTTCTATTTTGATGGTGATGGTAGCTTTAGTACAAGTACAGGCAACGTCACAGCAGGTGCTAACGGCTACTTTAACGATGTGTATATTCGTTCTGATGAAAAACTGAAAAGCAATTTCAATAAGATTGAAAACGCATTGGATAAGGTTGAACTGTTAAATGGTTTAACTTATGATAAAGCAAGCTATATCGGTGGTGAAACTGTTAAACGTGAAGCTGGTTTGATCGCACAGGAACTGCAAAAGGTATTACCGGAAGCCGTATCTGTTGGTAAGGATACCAAAGAAAACGAAGTGCTTGTTATTTCGCCAACTGCAACTATTGCATTACTGGTCGAAGCAATCAAAGAACTGCGTGAAGAAGTAAGGGAACTCAAATCCCGACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf6147778962a0f2a66cb159880fcc6766cc4f764faa3d952f6b56c32e4de03f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6498
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50