Protein

View in Explore

Genbank accession

XXQ42890.1 [GenBank]

Protein name

tail spike protein

RBP type

Evidence Phold

Probability 1,00

TSP

Evidence DepoScope

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,90

TSP

Evidence RBPdetect2

Probability 0,95

Protein sequence

MAYSWQEQILPAGAQTVPVEINYLDRSYIYLYVNREEVFDFTWDSDTRIRFDKPLDAESTVLIVRRTAKEFLYIMFSEGAAFIKENLDTQNTQFLHLAQELVEGRSIEGFFGTINMNGFRIINLAAGKDATDAVNKSQLDEVSTRVDNIEGAFNGVTSSYPMYFNTTEPTKEFRIALNFTKAAVYINGVCQTPGYSYTIRDNTVILADPVPAGTHVFMRLGEDVLEGGYATTESLAALSNALTRIDGPEVNPEYYHPHWRDSFDVRGWGVAGDAVTDDTAALQAMLAAAAPNQYIDGKGLTFKVTALPDLSRFRNAAFKYERLAGQPLTYVSEGYFEAGLTKITDTPFYNAWTQDKSFVYDNVIYAPFMAGERHGVQNLHVAWVRSGDDGQTWTMPEWLTPIHPNYASGVNYHCMSMGVSNNRLYMLVETRNLSDARRVRAEMWSRPMPYARRPTGGISTVAGDNFATVVLPMHGLKVGDTINFSNSGVTGVSGNTVVRTVVDANTITVPLTNAAASTLTNAGVTWSFGTRFWDCQWEVTLLPGIAYSTNADLAVTETHSFTALEGNAVAVGYHNGDVSPRRLGILYFPDVYNNPGVFERRTVSQEYANDASEPCIRYYDGELYLTTRGTSATSAGSTLARSTNSGLTWEYLRFPNKVHHSNLPFAKVGDELYIFSSERAANEWEADTPDNRYNGNYARTFMCKVNVRNWPSSLDEVQWFNVTDQIYQGNIVNSSVGVGSVCVKDGWLYYLFGGEDFLSPWSIGGNSAKRWYVQDGHPTDLYSYRIKVGPQQHVSRDFKYGAAPNRTVPVSMGVDGLRHVSAPMVFDESVEVNSLRVTGTGHNGIPAVRSEVLLDGDYGQIYKSVPTGNPAQQRLILSGGSGNSAASGAIVQLYGSNHSTPNRAVLYATGGVYTQNNLLPYNDSSVALGGASNRWSTVYAVTGTINTSDGTLKTAPEEVESALLDAWADVHIISFKWLDSLATKGDAARTHFGVIAQQVRDVLVTHGLMEPDATSCKYGFLCHDEYPEMVEHDEEGNVSVITPAGSRWGIRPDQMFFIEMLYQRRELARLKEQVKSLAHNKE

Physico‐chemical properties

protein length:	1082 AA
molecular weight:	119744,20150 Da
isoelectric point:	5,24774
aromaticity:	0,11183
hydropathy:	-0,28494

Domains

Domains [InterPro]

DC_1609
STR
1–345

DC_1609 IPR001724 IPR024427 IPR001724 IPR001724 IPR001724 IPR044914 IPR030392

IPR005604
ATT
14–102

IPR005604 IPR011049 IPR012334 G3DSA:3.30.750.60 G3DSA:2.120.10.10 IPR024430 IPR030392

IPR011049
STR
115–168

IPR011049 IPR036278 SSF69349 cd10144

IPR008635
RBD
120–159

IPR008635 IPR024429 IPR001724 IPR023366 IPR001724 IPR001724 IPR036388

IPR024428
ENZ
339–788

IPR024428

IPR001724
Unmapped
523–546

IPR001724

XXQ42890.1

1 1082

Architecture

STR

ATT

STR

ATT

STR

RBD

STR 1-13 | ATT 14-102 | STR 103-298 | ATT 299-334 | STR 335-947 | RBD 948-1079 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_1609	STR	DC_1609	1	345	Novel HMM	DC_1609	Central	Low	Positional only	263 proteins / 263 hits
IPR005604	ATT	DC_0240	14	102	InterPro cluster	Bacteriophage T7 tail fibre protein-like, N-terminal domain	Central	Medium	Text match	1326 proteins / 1328 hits
IPR011049	STR	IPR011049	115	142	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR011049	STR	IPR011049	115	168	Merged direct domain	Serralysin-like metalloprotease, C-terminal	Central	Low	Positional only	81 proteins / 81 hits
IPR008635	RBD	DC_0221	120	159	InterPro cluster	Trimeric autotransporter adhesin YadA-like, stalk domain	C-terminal	Medium	Text match	14 proteins / 17 hits
IPR012334	STR	IPR012334	247	298	Merged direct domain	Pectin lyase fold	Central	Low	Positional only	867 proteins / 867 hits
IPR036278	STR	IPR036278	269	794	Merged direct domain	Sialidase superfamily	Central	Low	Positional only	56 proteins / 56 hits
IPR024429	ENZ	DC_0802	271	336	InterPro cluster	Endosialidase, N-terminal extension domain	N-terminal	High	Text match	84 proteins / 84 hits
G3DSA:3.30.750.60	ATT	G3DSA:3.30.750.60	299	334	Merged direct domain	G3DSA:3.30.750.60	N-terminal	Low	Positional only	2 proteins / 2 hits
G3DSA:2.120.10.10	STR	G3DSA:2.120.10.10	335	788	Merged direct domain	G3DSA:2.120.10.10	Central	Low	Positional only	42 proteins / 42 hits
IPR001724	Unmapped	-	338	362	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR024428	ENZ	DC_0114	339	788	InterPro cluster	Endosialidase, beta-propeller domain	Central	High	Text match	92 proteins / 92 hits
IPR001724	Unmapped	-	404	432	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR024427	ENZ	DC_0382	449	531	InterPro cluster	Endosialidase, beta-barrel domain	Central	High	Text match	86 proteins / 86 hits
IPR023366	STR	IPR023366	452	532	Merged direct domain	ATP synthase subunit alpha, N-terminal domain-like superfamily	Central	Low	Positional only	44 proteins / 44 hits
IPR001724	Unmapped	-	523	546	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR001724	Unmapped	-	600	626	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR001724	Unmapped	-	678	704	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR001724	Unmapped	-	736	760	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR044914	RBD	IPR044914	791	947	Merged direct domain	Endosialidase, C-terminal domain superfamily	C-terminal	Low	Positional only	39 proteins / 39 hits
IPR024430	ENZ	DC_0521	791	947	InterPro cluster	Endosialidase, C-terminal domain	C-terminal	High	Text match	95 proteins / 95 hits
SSF69349	STR	SSF69349	795	947	Merged direct domain	SSF69349	Central	Low	Positional only	153 proteins / 153 hits
IPR001724	Unmapped	-	840	866	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR001724	Unmapped	-	872	899	InterPro	Glycosyl hydrolase 58	-	-	-	-
IPR030392	CHP	DC_0088	948	1077	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	948	1007	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
cd10144	CHP	DC_0088	948	1066	InterPro cluster	cd10144	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR036388	RBD	IPR036388	948	1079	Merged direct domain	Winged helix-like DNA-binding domain superfamily	C-terminal	Low	Positional only	96 proteins / 96 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

XXQ42890.1

1 1082

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	278	278	0,9963
Central domain	279	608	331	0,9279
C-terminal	609	1082	473	0,5848

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-278

Central
279-608

C-terminal
609-1082

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage vB_EcoP_P64441 [NCBI]	3403485	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Escherichia coli [NCBI]	562	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

XXQ42890.1 [NCBI]

Genbank nucleotide accession

PQ847473.1 [NCBI]

CDS location

range 37197 -> 40445
strand -

CDS

ATGGCCTATAGCTGGCAAGAACAAATTCTACCAGCTGGTGCACAGACTGTCCCAGTAGAGATCAACTATCTCGACCGTTCCTACATTTACTTGTACGTGAACCGTGAAGAGGTATTTGATTTTACTTGGGACAGTGATACGCGCATCCGCTTTGACAAGCCTCTCGATGCAGAGAGCACTGTACTGATTGTACGTCGCACTGCTAAAGAGTTTCTTTACATCATGTTCTCAGAAGGCGCTGCCTTTATTAAGGAGAACTTAGACACTCAGAATACCCAGTTCCTGCACTTAGCTCAGGAACTGGTAGAAGGTCGCAGTATCGAAGGTTTCTTTGGTACTATCAACATGAACGGCTTCCGCATCATTAATCTGGCAGCAGGTAAGGACGCTACGGATGCAGTTAATAAGTCACAGCTGGATGAGGTGAGTACCAGGGTAGATAACATCGAAGGTGCATTTAACGGTGTTACCTCCAGCTACCCTATGTACTTCAACACTACTGAACCTACTAAAGAGTTCCGAATTGCCCTTAACTTCACAAAGGCAGCAGTGTACATTAACGGGGTGTGTCAAACTCCGGGGTACAGTTACACCATTAGGGACAATACAGTAATACTAGCCGACCCTGTTCCCGCAGGTACTCACGTATTCATGCGACTAGGTGAGGATGTTCTGGAAGGAGGTTATGCTACTACTGAGAGTTTAGCTGCACTGAGTAACGCCTTAACTCGCATAGACGGGCCTGAGGTTAATCCTGAGTATTACCACCCTCATTGGAGAGATTCCTTTGACGTACGTGGATGGGGAGTAGCAGGTGATGCAGTTACGGATGATACGGCAGCACTTCAAGCCATGCTGGCAGCAGCGGCCCCTAATCAGTACATAGACGGTAAAGGTTTAACTTTTAAAGTAACTGCCTTACCTGACCTCAGCCGCTTCCGCAATGCCGCGTTTAAGTATGAGCGCTTAGCGGGTCAGCCTCTTACTTATGTATCGGAGGGTTATTTCGAAGCAGGTCTTACTAAGATTACAGACACCCCGTTCTACAATGCGTGGACTCAGGATAAGTCTTTCGTATATGATAATGTAATATACGCACCATTCATGGCAGGTGAACGGCATGGCGTACAGAACCTGCATGTAGCATGGGTACGTTCAGGTGACGATGGTCAGACGTGGACGATGCCAGAATGGCTTACTCCTATCCACCCTAACTATGCCTCAGGTGTTAACTACCATTGTATGAGCATGGGTGTTTCTAATAACCGCTTGTACATGCTAGTAGAGACCCGTAATCTATCTGACGCTAGGAGGGTACGGGCGGAGATGTGGTCGCGCCCAATGCCGTATGCTCGTAGGCCTACTGGGGGTATCAGCACAGTGGCTGGGGATAACTTCGCTACTGTAGTACTTCCTATGCATGGGCTTAAGGTAGGAGATACTATTAACTTCTCGAACTCTGGGGTTACGGGTGTTTCAGGTAATACTGTAGTACGTACCGTAGTTGACGCTAATACTATTACAGTACCTTTAACTAACGCAGCTGCCTCAACGTTGACCAACGCCGGGGTTACTTGGAGCTTTGGTACACGTTTCTGGGACTGCCAGTGGGAAGTGACCTTACTGCCGGGAATCGCATACTCTACTAACGCTGACTTAGCTGTAACTGAAACCCATAGCTTTACCGCCCTTGAAGGTAACGCAGTTGCAGTAGGTTATCATAACGGTGACGTCTCTCCTAGACGTTTAGGTATTCTGTACTTCCCTGATGTGTACAACAATCCCGGAGTATTTGAACGTCGTACAGTGTCTCAGGAGTACGCGAACGATGCCTCCGAACCTTGCATACGCTATTACGACGGGGAGTTGTATCTTACTACTCGGGGAACATCCGCCACCTCCGCAGGTTCTACCTTGGCACGTAGTACTAACTCAGGCTTGACTTGGGAGTACTTACGTTTCCCTAACAAGGTACATCACAGTAACCTACCTTTTGCTAAGGTGGGGGACGAGTTGTATATCTTCTCAAGCGAGCGGGCTGCAAACGAGTGGGAAGCGGATACCCCTGATAACCGTTACAACGGTAATTACGCACGCACCTTTATGTGCAAGGTTAACGTCCGTAACTGGCCTAGCTCATTAGATGAGGTGCAGTGGTTTAATGTTACCGACCAGATTTATCAGGGTAACATAGTTAACTCCTCAGTAGGGGTAGGTTCTGTATGCGTTAAGGATGGGTGGCTGTACTATCTGTTCGGCGGAGAGGATTTCTTATCCCCGTGGTCCATTGGAGGTAACTCTGCTAAGCGCTGGTACGTGCAGGATGGTCATCCTACTGACCTGTACAGCTACCGTATTAAGGTAGGTCCGCAGCAGCATGTGTCTCGCGACTTTAAATACGGGGCAGCACCTAACCGTACTGTACCTGTGTCCATGGGGGTAGACGGGTTACGCCATGTTTCAGCGCCTATGGTCTTTGATGAGAGCGTAGAGGTTAACTCCTTACGTGTTACAGGTACTGGGCATAACGGAATCCCTGCTGTACGGTCTGAAGTACTTCTGGACGGGGATTACGGTCAGATTTACAAGTCAGTGCCTACTGGTAACCCAGCACAGCAACGGCTTATTCTGAGCGGGGGGTCAGGTAACTCCGCTGCCTCTGGCGCTATTGTGCAACTCTATGGATCTAATCACAGTACGCCTAATAGGGCAGTCCTGTACGCAACGGGAGGTGTCTACACTCAAAACAACCTGCTACCTTATAACGACTCCTCTGTAGCATTAGGGGGCGCGTCTAATAGATGGAGTACGGTGTATGCTGTTACAGGCACTATCAATACTTCTGACGGTACTCTTAAAACAGCCCCGGAGGAAGTGGAATCGGCACTGTTAGATGCTTGGGCGGATGTACACATCATTAGCTTTAAGTGGCTTGACAGTCTAGCTACTAAAGGGGACGCTGCTCGTACTCACTTTGGTGTAATAGCACAGCAGGTGCGTGACGTGCTCGTTACGCACGGACTTATGGAGCCTGATGCTACTTCATGTAAGTACGGGTTCCTGTGCCACGATGAGTACCCTGAGATGGTGGAACATGACGAGGAAGGTAATGTAAGTGTAATTACTCCTGCAGGAAGTCGTTGGGGTATTCGACCTGACCAGATGTTCTTCATTGAGATGCTGTACCAGCGTAGAGAGCTTGCCCGTCTAAAGGAGCAGGTAAAATCGCTGGCACATAATAAGGAGTAA

Genome Context

Tertiary structure

PDB ID

25270fcf5c50e91ac786ce3c36501e01edeadf60eed753a95a98becae1c33374

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7492

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Characterization of the novel phage vB_EcoP_P64441 and its potential role in controlling UPEC in disposable catheters and inhibiting biofilm formation	Xiaoyue,L.	2025-08	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature