Protein

View in Explore
Genbank accession
AGH56995.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MTAGRLAASKPGATTNTILYSPDIDNSASVVLTAANQSGSGVSYRAALRDYDQILTLDGDETTALEFTKGNPVSEYKLKISPGISFTDATPGADITTQNGGTAKLLDVFKDTALLERWVKVEKLLETTGDNASLTGIFQLGETVTGGTSGVAGVLRSLDTESGTFHVAIADVASGATAVNVSRNTGLADAARLMISDTASETGTEIISIDASGINTTTNVLTVTRGVYGTTASAIPAGAFAKCFIDSATTSTINEGATFAAGDTTLTLADATGFLEGGFIQIGNETIQVSAVAGNDLTVVRGQYGTSAVNHNDGVTVTQLTDAGDYHLNFYTEGETITGGTSNATLPLNFSQLSNPITNQDRFIVAEGAIGGTYELYLNKNLNNERTYRFWQTDASNTGHPFRLSEETDGTQSLSGTEYTTGVTKVGTAGQAGCYLEIEITANSPLSLSSYAEPAVANTADSNAGFGWSLNIVSAPAYEEIFIYKLRGAPFNAADQFTLGETTYTVEAAGVTPGAWGYVHSFDKALNLLKVSLDGDSAAFAAGGQIYDTPTIVNENRVMATIVAGKARTLDSVSGADASRAAGTYTGLAPTGGNGTLLKVDVTVDGAGAATVTLINGGKNYQANDTVTLTDSVLGGGGGASLTFDVATIGTGQSIGATATTYANDEDYFAYGKAVAANAVDRTTGIVVGPGQNILVYSSAADISYNVTGFESQSDDYTQILNSKTTG
Physico‐chemical
properties
protein length:727 AA
molecular weight: 74801,19500 Da
isoelectric point:4,30944
aromaticity:0,07565
hydropathy:-0,04979

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage P-RSM6
[NCBI] 		929832 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH56995.1 [NCBI]
Genbank nucleotide accession
HQ634193.1 [NCBI]
CDS location
range 167966 -> 170149
strand -
CDS
ATGACAGCAGGAAGGTTAGCCGCCTCAAAACCAGGGGCAACGACAAATACAATACTATACAGTCCTGATATAGACAACAGTGCATCTGTAGTATTGACAGCAGCAAATCAATCAGGATCAGGTGTGTCATATCGTGCAGCATTGCGTGACTATGATCAGATTTTGACACTTGATGGTGATGAAACGACTGCATTAGAGTTCACGAAAGGGAACCCAGTATCAGAATATAAATTAAAAATTAGTCCAGGTATCAGTTTCACTGATGCTACACCTGGTGCAGATATTACGACCCAGAATGGTGGTACAGCAAAACTCCTTGATGTGTTTAAGGACACTGCTCTTTTAGAGAGATGGGTCAAGGTAGAGAAATTACTTGAGACAACGGGTGATAACGCAAGTTTAACGGGTATATTCCAACTTGGTGAGACAGTAACTGGTGGTACATCAGGTGTTGCAGGTGTATTGAGAAGTCTAGACACTGAGTCTGGAACTTTTCACGTCGCTATAGCAGATGTAGCTTCGGGGGCCACAGCAGTTAACGTATCAAGAAACACAGGTCTTGCAGATGCTGCAAGGTTAATGATCTCTGATACTGCTTCTGAAACTGGTACAGAAATTATATCTATTGATGCTTCTGGTATTAACACTACTACCAATGTATTAACAGTAACAAGAGGAGTATATGGTACAACCGCAAGTGCAATCCCTGCAGGAGCATTTGCTAAGTGCTTTATCGACTCTGCTACTACATCTACTATTAACGAAGGTGCTACTTTCGCTGCAGGTGATACAACTCTTACACTTGCAGATGCAACTGGATTCTTAGAAGGTGGTTTCATACAGATTGGTAACGAGACAATTCAGGTTTCTGCTGTTGCAGGTAACGACTTGACTGTTGTTCGTGGTCAGTATGGTACTTCTGCAGTTAACCACAATGATGGTGTTACAGTTACACAGTTAACTGATGCAGGTGATTATCATCTTAACTTCTATACTGAAGGTGAAACTATCACTGGTGGTACATCTAATGCTACTTTACCATTAAACTTCTCTCAACTTTCTAACCCTATCACTAACCAAGATAGATTTATTGTTGCAGAGGGTGCTATTGGTGGTACATATGAACTATATCTGAATAAGAACCTTAATAATGAAAGAACATATAGATTCTGGCAGACAGATGCTTCTAACACAGGACATCCTTTCAGATTATCTGAAGAGACTGATGGTACTCAGTCATTAAGTGGTACAGAGTATACCACTGGTGTAACTAAGGTAGGAACCGCAGGACAAGCAGGATGTTATTTGGAGATTGAGATCACTGCTAACTCACCACTATCGTTATCATCATACGCAGAACCTGCAGTAGCAAACACTGCTGACAGTAACGCAGGGTTTGGTTGGTCACTAAACATTGTATCTGCTCCTGCTTATGAAGAGATTTTCATCTACAAACTAAGAGGTGCACCATTTAATGCTGCTGATCAGTTTACTTTAGGTGAGACAACTTACACTGTCGAAGCAGCAGGTGTAACTCCAGGTGCATGGGGTTATGTACACTCCTTTGATAAGGCACTTAACTTACTGAAAGTTTCACTTGATGGTGATTCTGCAGCATTTGCAGCAGGTGGTCAGATTTATGACACACCAACTATTGTTAATGAAAATAGAGTTATGGCAACTATTGTTGCAGGTAAAGCAAGAACTCTGGACAGTGTAAGTGGTGCTGACGCTTCTCGTGCTGCAGGTACATATACTGGATTGGCACCTACAGGTGGTAATGGAACACTTCTCAAGGTTGATGTAACAGTTGATGGAGCAGGTGCAGCTACTGTAACTCTTATCAATGGTGGTAAGAACTATCAAGCAAATGATACTGTAACTCTTACAGACTCCGTTCTTGGTGGTGGAGGTGGAGCATCATTGACATTTGATGTGGCAACTATAGGTACAGGACAGTCTATAGGTGCTACTGCAACAACTTATGCTAATGATGAAGATTATTTCGCTTATGGTAAAGCGGTTGCAGCAAATGCTGTTGATCGCACAACTGGTATCGTAGTCGGTCCAGGACAAAACATTTTAGTTTATAGTTCTGCTGCTGATATCTCATATAATGTAACTGGTTTTGAGTCTCAGTCAGATGATTACACACAAATACTGAACAGTAAGACCACTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f114530240d3d94f3000e4d89986a940c96bb1909fa24b0faf5953ebe13809a1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5524
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-RSM6 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank