Protein

View in Explore
Genbank accession
QIG78278.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,91
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MPSQNHTTHYGLTQYSDNGSDRVSFLGDYTGDMAKIDETLFNASDSSSNAITEAKSAQAKADTATTTANKALSNSSQASSDASNALSTANAAATTATNAKTSADTATTVSNEASTIAKQAKAEADDNKAKKEDKGVAYPKDIADKRFAIWPKGLIQENMIIIGDSISYGTGASALTQSWANMIGAERESNVVNISANNAGYVNGPTFMSELQSFSGDKTAITHIVIVGGANDKLQKLDDVTSAAQALYRYAITNFPNARIFVIPCLLGFYGGDRYHGNIMNTVHAIELALSRVRGVVEIPYGWEWLAGNERWSSDYSIHPNDNGNRELMRIISNCIDSSHSYRNSWKGEVYGANGHGNVIHGEAWATAGIYSVNIQMKITGTANSYSPFVSVSNAGSWANNTYVPNSINKLLYTNDNDASQAHRCSIACTDNLADGTEIYLSYSKGVAA
Physico‐chemical
properties
protein length:449 AA
molecular weight: 48000,20760 Da
isoelectric point:5,47953
aromaticity:0,08241
hydropathy:-0,37572

Domains

Domains [InterPro]
DC_1277
STR
1–155
DC_1277 IPR036514
SSF52266
STR
155–335
SSF52266 DC_2299
SSF52266
STR
159–337
SSF52266
cd00229
ENZ
161–332
cd00229
IPR013830
ENZ
162–326
IPR013830
QIG78278.1
1 449
Architecture
STR
RBD
STR 1-339 | RBD 340-449
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG78278.1
1 449
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,7725
Central domain 141 339 200 0,7621
C-terminal 340 449 109 0,9909
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-449

Taxonomy

  Name Taxonomy ID Lineage
Phage Bifidobacterium phage BadAztec2
[NCBI] 		2713244 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bifidobacterium asteroides
[NCBI] 		1684 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Bifidobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG78278.1 [NCBI]
Genbank nucleotide accession
MT006239.1 [NCBI]
CDS location
range 4220 -> 5569
strand -
CDS
ATGCCTAGTCAGAATCATACCACGCATTACGGTCTGACGCAATACAGTGACAACGGTTCGGATCGTGTGTCTTTTCTCGGTGATTACACCGGGGATATGGCCAAAATCGATGAAACGCTGTTCAATGCCTCGGACTCCTCTAGCAATGCTATCACGGAAGCCAAGTCGGCGCAAGCCAAGGCAGACACAGCAACCACCACAGCGAACAAAGCCCTTTCAAATTCATCTCAAGCAAGCAGTGACGCAAGCAACGCGCTAAGCACTGCAAACGCGGCCGCCACAACCGCGACCAATGCCAAGACTTCAGCCGATACCGCGACCACTGTTTCAAATGAAGCAAGCACGATCGCCAAACAGGCCAAAGCCGAGGCAGATGACAACAAAGCGAAGAAAGAGGACAAGGGCGTAGCATACCCCAAGGACATAGCCGATAAGCGTTTTGCGATCTGGCCCAAGGGTCTCATTCAAGAAAATATGATTATTATCGGCGATTCCATCAGCTACGGCACAGGGGCCAGCGCCTTGACCCAGTCGTGGGCGAACATGATCGGTGCCGAGCGTGAGTCCAATGTTGTCAATATTTCGGCGAACAATGCGGGCTACGTAAACGGGCCTACGTTCATGTCTGAACTTCAAAGTTTTTCGGGGGACAAGACGGCGATCACCCATATCGTCATTGTCGGTGGCGCAAACGACAAACTGCAAAAACTTGACGACGTAACGTCAGCGGCACAGGCTCTCTACCGCTATGCGATCACCAATTTCCCGAATGCAAGAATATTTGTAATTCCGTGCTTGCTTGGTTTCTACGGTGGCGATCGATACCATGGAAACATTATGAATACAGTGCACGCCATTGAGCTGGCGCTTAGTCGTGTTCGTGGTGTTGTTGAAATTCCGTATGGTTGGGAATGGCTGGCCGGAAATGAACGGTGGTCTTCTGACTATTCCATCCATCCGAACGACAACGGCAACCGCGAGCTTATGAGGATCATCAGCAACTGCATTGATTCGTCCCATTCCTATAGAAATTCTTGGAAGGGGGAAGTGTACGGTGCCAACGGACACGGCAACGTCATTCACGGTGAGGCATGGGCGACAGCCGGTATCTATTCCGTAAATATTCAAATGAAGATCACCGGTACCGCGAATTCATACTCGCCATTCGTTTCCGTAAGCAACGCGGGATCGTGGGCAAACAACACATACGTCCCCAATAGTATAAATAAATTGCTATACACAAACGACAATGACGCGTCGCAAGCTCACCGTTGCTCAATCGCTTGCACCGATAATCTTGCTGACGGTACTGAAATTTATTTGAGCTATTCCAAGGGTGTTGCCGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
70f6421ff0be316a0a09539ebd73d699efd2d8769a1f9c7bb446052f5dfed1b9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7445
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Honey bees harbor a diverse gut virome engaging in nested strain-level interactions with the microbiota Bonilla-Rosso,G., Steiner,T., Wichmann,F., Bexkens,E. and Engel,P. — — GenBank