Protein

View in Explore
Genbank accession
QBX18087.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,55
Protein sequence
MEITIHNSKLQKVAYVDDELQDTLSFHSDLWSRYLKTASSTFQFTVFQKAIKSDMIQKEAYRTLTERSFISFIYNGKSRVFNVMKTKENGFEIECTCLDLNIELLNEDAGKYEATTEMSFVEYCNAFFILAGGSITIGHNEIADYRRTLKWDGTDTKLNRLQSLATQFDAEIEFETILDKDSSLKAFVLNIYKKNDGKGRQGLGKKRDDVYLEYGRNIKNVERTIDKTNIFNMITPIGRATVDVKVTKANPKYVAPQVGTVTYSGGGLSNGGRTISKSLVNEILNLCVQHKLLPSGVFSQLYLESFWGNSPVARADNNWGGLTWTGSGNRPSGIKVTQGTARPANEGGYYMHFASVSDYFKDYTYLLAEQGIYKVKGANNIDAYTKGLFRVGGAAYDYAAAGYGHYAPLMRSIRNGINSASNGAMDTLDNQFKTAGTVGTAPVSQIATKTKDALAQLGAIKGQRVGSGQCYALSALYSLKLGGAGLGGGVTGFRGLRPGGGAAASQIGEDYNWSQFGWKVVRPSEVKHLIPGSIANIRANAGGPVFTGGWGHTVVIKGLSGDTLTVYEQNYAGHQFVEERTYSASAYLRVIQTLVYPPEIVQGKRIDGTESAPTQSGTTGNNEPKTISETQQQEKTVGIPTDLYREWKNEDGVVEFYIKNGSIYAPISKELYPSVFTGEEISDNWIKKSVEYQTIDIEQIISYSLEELKKHCYPEISYVVDGYTGDLDIGDTVVVEDEEFPDELFLEARVTEQHISFTNPSQNKTVFDNFKALENKLNSSLIDRYEELAEQAKPFELRLLTDKGTQFKNSTGLSVLTAELWKNNKQYDATFQFRNFDTLLASGLSYTADGSTVPIDKPFLVSIDAFIGNDLVATRQITFTNVSDGTDGIGINSTSVTYGLSNSADTQPTSWSDKLPSAGEGQYLWTRKITDYTDDAKEDTIEYTYSYQGKTGVAGTSIKVSKIEYQIGTSGTVAPSGAWLTTIPSVPDGQFLWSKTTMSDNSIIYGISKQGADGKTQYTHIAYANIEFLCKERGNFTLSEVSLVRYGSDSRWVYKEFQAGTYTATTNLWGSDPASGTTKNVELVSEFSTSNSIDTTYIGIYVDFVESDSVDPSKYNWTLVKGADGTQGTPGTPGADGKTPYFHTAWSNNADGTLDFNPDYKSAVGLDILNFTSWAKNTSMSSSTYNFVGNADRSFKVTGKGTGGYEVLSKSFPAKVGDKLRFTVRYTNRLAFALYNNYGLQFVVNNAYTESVTSTSKIVLPNAITASTEYQLEYTATTSNVWMQLNFGGVADSAQVDFDIEIEVENLTSPVKYAYMGTYSDYTANDSTVPTDYIWSRILGEDGAKGDKGALDEEQVKEITDKIDTKSDSELTQEQLNLLLETQNLMTAEMRTKATAEEVDALIASYNKYVSDESVNKANVEAELIANAERIEAFRKDYDDKMLQLDFVSNYMRATDLGLEVSASDGSSSLLIQKDRISMFSAGKEVMYISQGLIHIDNGVFTKTLQIGNFRESQADGDPTTNLEIYVG
Physico‐chemical
properties
protein length:1528 AA
molecular weight: 168351,27530 Da
isoelectric point:4,94655
aromaticity:0,10798
hydropathy:-0,39116

Domains

Domains [InterPro]
DC_0558
ATT
1–400
DC_0558 G3DSA:3.90.1720.60 DC_0002 DC_0120
IPR010572
ENZ
132–255
IPR010572 IPR002901 IPR007921
G3DSA:1.10.530.10
RBD
276–411
G3DSA:1.10.530.10 DC_0002
IPR002901
ENZ
286–395
IPR002901
QBX18087.1
1 1528
Architecture
ATT
RBD
STR
STR
ATT 1-400 | RBD 401-411 | STR 412-1126 | STR 1128-1527 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX18087.1
1 1528
Domain Start End Length (AA) Confidence
N-terminal 1 325 325 0,8687
Central domain 326 654 330 0,4393
C-terminal 655 1528 873 0,0263
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-325
Central
326-654
C-terminal
655-1528

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan393
[NCBI] 		2548146 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus parauberis KRS-02083
[NCBI] 		1207545 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus parauberis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX18087.1 [NCBI]
Genbank nucleotide accession
MK448750.1 [NCBI]
CDS location
range 33365 -> 37951
strand +
CDS
TTGGAAATTACTATACATAATTCTAAGTTACAAAAAGTAGCTTACGTAGACGACGAATTACAAGATACGCTATCCTTCCATTCGGATTTGTGGTCACGTTATCTCAAAACAGCTTCATCAACTTTTCAATTTACAGTATTTCAAAAAGCAATCAAATCAGACATGATACAAAAAGAGGCCTATCGGACACTAACCGAAAGGTCTTTTATTTCATTCATTTACAACGGTAAATCTCGTGTATTTAATGTTATGAAGACAAAAGAGAACGGATTTGAAATTGAATGCACATGTTTAGATTTAAATATTGAGTTATTAAATGAAGATGCAGGTAAGTACGAAGCTACGACAGAAATGTCGTTTGTAGAGTATTGTAACGCATTTTTTATTTTGGCTGGTGGCTCAATCACTATTGGTCACAATGAAATAGCTGATTACCGAAGAACTTTAAAGTGGGACGGTACAGATACTAAGTTAAATAGATTGCAATCATTAGCAACACAATTTGACGCAGAAATTGAATTTGAAACTATTTTAGATAAAGATTCATCGTTAAAAGCCTTTGTTTTAAATATCTATAAAAAGAATGATGGAAAAGGTCGCCAAGGGTTAGGTAAAAAACGTGACGATGTGTATCTTGAGTATGGACGAAATATCAAAAATGTAGAGCGAACGATTGATAAAACTAACATATTTAACATGATTACACCAATTGGAAGGGCTACAGTAGACGTAAAAGTCACCAAAGCAAATCCAAAATACGTGGCACCACAAGTTGGAACAGTCACTTATTCAGGAGGTGGGCTTTCAAACGGCGGTCGGACAATCAGTAAAAGTCTTGTAAATGAGATTTTAAATCTATGTGTTCAACATAAGTTATTACCGTCTGGAGTATTCTCTCAGTTATATTTAGAATCTTTTTGGGGCAATTCGCCAGTCGCAAGAGCTGACAACAACTGGGGCGGTTTAACATGGACTGGTTCAGGTAATCGCCCGTCTGGTATTAAAGTTACGCAAGGTACTGCTAGACCTGCCAATGAGGGCGGTTATTACATGCATTTCGCAAGCGTGTCTGACTACTTTAAAGACTACACTTATTTATTAGCAGAGCAAGGTATATACAAAGTTAAAGGTGCTAACAACATTGACGCTTATACAAAAGGTCTATTTCGTGTTGGCGGTGCAGCATATGATTATGCGGCTGCAGGGTATGGTCATTATGCACCTTTAATGCGGTCAATCCGTAACGGTATCAATAGCGCTTCAAACGGTGCAATGGATACACTTGACAACCAATTTAAAACTGCTGGCACAGTTGGGACTGCACCAGTAAGTCAAATAGCAACTAAAACAAAAGATGCTTTGGCTCAACTTGGGGCAATTAAGGGTCAACGTGTTGGGTCTGGTCAGTGTTACGCTTTGTCAGCTTTGTACTCACTTAAATTAGGTGGAGCTGGTCTTGGTGGTGGGGTTACTGGTTTTAGAGGGTTAAGACCCGGAGGAGGTGCTGCAGCCTCACAAATCGGCGAAGATTACAATTGGTCACAATTTGGTTGGAAAGTTGTTAGACCATCAGAAGTTAAGCATTTAATTCCGGGATCAATCGCTAATATCCGAGCAAACGCAGGTGGACCAGTGTTTACAGGTGGCTGGGGGCATACAGTAGTTATCAAAGGGTTGTCTGGAGATACATTAACTGTATACGAACAAAACTATGCTGGTCACCAATTCGTAGAAGAGCGCACGTACTCCGCAAGTGCTTATTTACGAGTTATCCAAACTTTAGTTTACCCTCCTGAAATCGTTCAAGGAAAACGTATAGACGGCACAGAGAGTGCACCAACACAGTCAGGCACGACTGGAAACAATGAGCCTAAGACTATTTCAGAAACGCAACAACAAGAAAAAACTGTCGGTATTCCAACTGATTTATATCGTGAGTGGAAAAACGAAGATGGTGTAGTAGAGTTTTACATTAAAAACGGCTCTATATATGCACCAATATCAAAAGAACTTTATCCATCTGTTTTTACAGGGGAAGAGATTAGCGATAACTGGATTAAAAAGTCGGTAGAGTATCAAACAATCGACATCGAACAAATTATATCCTACTCACTAGAAGAATTAAAAAAACATTGTTATCCAGAAATTAGTTATGTTGTTGATGGCTATACAGGTGATTTAGACATTGGAGATACTGTAGTCGTAGAAGACGAAGAATTTCCAGATGAATTATTTTTAGAAGCGAGAGTGACTGAACAACATATAAGTTTTACTAACCCAAGTCAAAACAAAACTGTCTTTGATAATTTTAAGGCGTTAGAAAATAAACTCAATAGTAGTTTAATTGATCGATACGAAGAGTTAGCTGAACAAGCTAAACCGTTTGAGTTACGATTGTTGACAGATAAAGGCACTCAATTTAAAAACTCAACTGGTCTATCAGTGCTAACCGCAGAACTTTGGAAAAATAATAAGCAATATGATGCAACCTTCCAATTTAGAAATTTTGATACTTTGCTCGCTAGTGGATTATCTTACACTGCTGACGGTTCGACAGTTCCGATTGATAAGCCGTTTTTGGTTTCAATCGATGCATTTATTGGTAATGACTTAGTCGCTACAAGACAAATAACATTTACAAATGTTTCAGACGGAACAGACGGAATTGGAATAAATTCAACATCTGTTACTTATGGTTTATCTAATTCAGCTGATACGCAACCAACATCATGGAGCGATAAACTCCCTAGTGCTGGCGAAGGTCAATATCTATGGACTCGTAAAATTACCGACTATACGGATGATGCAAAAGAAGACACTATTGAGTACACTTATAGCTATCAAGGTAAAACTGGGGTAGCTGGTACATCTATAAAAGTATCTAAAATTGAGTATCAGATTGGGACAAGTGGCACAGTCGCACCAAGTGGAGCATGGCTAACTACAATTCCAAGTGTTCCAGACGGTCAATTTTTGTGGTCTAAGACAACGATGTCAGATAACAGCATTATCTATGGTATTAGTAAGCAAGGGGCAGACGGCAAAACACAATATACTCACATTGCATATGCCAATATCGAATTTCTTTGTAAAGAAAGAGGTAATTTTACATTGTCTGAGGTATCTCTTGTTAGATACGGTTCAGATAGTCGTTGGGTATATAAAGAATTTCAAGCTGGAACTTACACAGCGACAACTAATCTTTGGGGGAGTGACCCAGCTAGCGGTACTACAAAAAATGTCGAGTTGGTAAGTGAATTTTCAACCTCAAATTCTATCGACACAACATATATTGGGATCTATGTTGATTTTGTGGAATCTGACAGCGTTGACCCATCAAAATATAACTGGACGCTCGTTAAAGGAGCGGACGGAACGCAAGGGACACCGGGCACACCTGGGGCAGACGGTAAGACACCATATTTTCACACAGCATGGTCAAACAACGCAGACGGCACTCTTGATTTTAATCCTGATTATAAATCAGCTGTTGGACTAGATATTTTAAATTTTACTAGCTGGGCGAAAAACACTTCAATGTCTAGTTCTACTTACAACTTTGTTGGTAATGCCGACAGAAGTTTTAAAGTTACTGGAAAAGGCACTGGCGGATATGAAGTATTATCTAAATCATTCCCAGCTAAAGTTGGGGACAAACTTAGGTTTACCGTCCGCTATACCAACCGCCTAGCCTTTGCATTATATAATAACTATGGTTTGCAGTTTGTAGTAAACAACGCATACACAGAGAGCGTTACATCAACAAGTAAAATTGTGTTACCAAACGCAATTACAGCGTCAACGGAATATCAGTTAGAATACACCGCAACAACTAGCAATGTTTGGATGCAATTAAACTTTGGTGGCGTAGCAGATAGCGCACAAGTGGATTTTGATATCGAGATTGAAGTGGAAAATCTAACTAGTCCCGTTAAATATGCGTACATGGGTACTTATTCAGATTACACTGCTAATGATAGCACTGTTCCAACTGATTATATTTGGAGCCGTATTTTAGGGGAAGATGGGGCTAAAGGCGACAAGGGCGCTTTAGATGAAGAGCAAGTAAAAGAAATCACTGACAAGATCGACACAAAATCGGATAGCGAACTAACTCAAGAACAATTAAATCTCTTGCTTGAGACTCAAAATTTAATGACTGCTGAAATGCGAACTAAAGCGACCGCCGAAGAAGTTGACGCTTTGATTGCAAGCTACAACAAATATGTATCAGATGAATCTGTAAACAAGGCGAACGTAGAAGCTGAACTTATCGCAAATGCTGAACGTATTGAAGCTTTTAGAAAAGATTATGATGATAAGATGCTTCAATTAGATTTTGTATCTAATTACATGAGAGCGACTGATTTAGGTTTGGAAGTTTCTGCTAGCGATGGTTCATCAAGCTTGTTAATTCAAAAAGACCGTATATCAATGTTTTCAGCTGGTAAAGAGGTTATGTATATCAGTCAAGGATTAATCCACATTGACAACGGGGTGTTTACTAAGACGCTTCAAATTGGTAATTTCCGTGAGTCACAGGCTGATGGTGACCCAACAACAAACTTAGAAATTTATGTAGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
be33ec0344152a79dd348023078e77b860928e8d266ee0e80918d4bfd4528115
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7759
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50