Protein

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Genbank accession
QYW02753.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSNTNQIGYAFAGTKLTLPYIGAGYIAGEAPPPLVPDHPDGRTYVNYELKPLVVKVLHADSFTPMAEVKSLADGTWRVDGLNPSMRYQVIFQNDTYRDAGNNLYNSAIQDWVGAVPTTYVAPADALTLSVPPVMERWAMPTSIQAFSVNGGLLSVPTYSGTFTGLTVQANKSNVTVNLTPLQPAGTYTLQVSAVKDVATISSNICTFRIKPQTVDTQQFIRFALLGTVAGAASVQSTWNRSTPAGWTLSNGTFTADPDMLSPDYPVSLNSDWSVDIMSGSMYNDGAGNWISLNNGYNNGITVEGWFNVSSWPASDSAMLTSIKTSSGQSTLFGLTLLPSKKIGTIMKYGSTNSLRFENSGEAVYELPTNEWFHILVHIPPSQFDGYLYVNGQYVDKWSMIRKNGLPTNTNMNVAYVTFMCNNDQGCTGTAVAKCNKVVWTESRFSSPNFTPTKTKYHEYQATVHCATYGVNNVAVNEMSSCDGTWSTTGNMPSRPVFDPTQGVVFPNTTATDGYASMYITRGYGGVKPSFCLDVWFKPLTAYNGDKNIVQLGNPNSADGRAHIALNNGKLKAYGCPYTTSTAVTLNGTTTLNNNQWYLATLACDVLGREWRLYLDGALEASISDPNLAPMALPAMSSMPYIILGGRHPLSSATGTIPSFHGIIGATRLTINGPRYYSGFTPTGIGAWDTLPARPAA
Physico‐chemical
properties
protein length:696 AA
molecular weight: 75188,81710 Da
isoelectric point:6,31535
aromaticity:0,10632
hydropathy:-0,15402

Domains

Domains [InterPro]
DC_0739
ATT
1–245
DC_0739 G3DSA:2.60.120.200 IPR013320
IPR013320
STR
284–409
IPR013320 IPR013320
PF13385
LEC
285–399
PF13385 G3DSA:2.60.120.200
PF13385
LEC
529–626
PF13385
QYW02753.1
1 696
Architecture
ATT
STR
STR
ATT 1-245 | STR 246-430 | STR 470-670 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYW02753.1
1 696
Domain Start End Length (AA) Confidence
N-terminal 1 17 17 0,9114
Central domain 18 285 269 0,4736
C-terminal 286 696 410 0,7110
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-17
Central
18-285
C-terminal
286-696

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage Marzo
[NCBI] 		2859652 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYW02753.1 [NCBI]
Genbank nucleotide accession
MZ326868 [NCBI]
CDS location
range 129471 -> 131561
strand +
CDS
GTGAGTAACACGAATCAAATTGGCTACGCTTTCGCTGGCACAAAACTGACGCTACCTTACATCGGCGCTGGTTATATCGCAGGTGAGGCTCCACCTCCGCTTGTCCCGGATCATCCAGACGGCAGAACCTATGTCAACTATGAGCTTAAGCCTCTGGTTGTCAAGGTCTTGCATGCCGACTCATTCACGCCCATGGCTGAGGTCAAATCTCTAGCAGACGGCACTTGGAGAGTTGATGGTCTGAACCCATCCATGCGTTATCAGGTGATCTTCCAGAACGACACCTACAGGGACGCAGGCAACAACCTGTACAACTCAGCTATCCAGGATTGGGTCGGAGCTGTGCCGACCACATATGTTGCACCAGCTGATGCCTTGACTTTGTCTGTTCCTCCTGTGATGGAGAGATGGGCTATGCCGACAAGCATTCAGGCTTTCTCTGTCAATGGTGGCTTGCTGTCTGTTCCCACATACTCTGGCACGTTCACTGGGTTGACGGTGCAAGCCAACAAATCCAACGTGACCGTCAATCTGACACCATTGCAGCCGGCTGGCACATACACTTTGCAAGTCTCGGCGGTCAAAGACGTAGCCACAATCAGCAGCAACATTTGCACGTTCAGGATCAAGCCCCAGACTGTAGACACACAGCAGTTCATTCGCTTTGCTCTTCTGGGCACAGTGGCTGGTGCCGCTAGCGTGCAATCTACATGGAACAGATCGACACCTGCAGGTTGGACTTTGTCGAATGGCACATTCACAGCCGATCCTGATATGCTATCTCCAGATTATCCTGTGTCATTGAACAGTGACTGGAGCGTGGATATCATGAGTGGTTCGATGTACAATGATGGTGCGGGTAACTGGATCTCACTGAACAACGGCTACAACAACGGGATCACTGTCGAGGGTTGGTTCAATGTGTCCTCATGGCCAGCATCTGACTCGGCTATGTTGACTAGCATCAAGACCTCATCTGGTCAATCTACTCTGTTTGGCTTGACGCTCTTGCCTTCTAAGAAGATTGGTACCATCATGAAGTATGGTAGCACCAACTCACTGCGCTTTGAGAACTCTGGTGAAGCTGTGTACGAGCTACCAACCAACGAGTGGTTCCACATCTTGGTGCATATCCCACCTAGCCAGTTTGATGGCTATCTGTATGTCAATGGGCAATACGTTGATAAGTGGTCCATGATCAGAAAGAACGGATTGCCAACCAACACAAACATGAACGTGGCTTATGTGACGTTCATGTGCAACAACGATCAGGGCTGCACAGGGACAGCAGTAGCGAAGTGCAACAAGGTGGTGTGGACAGAAAGCAGGTTCTCCAGCCCCAACTTCACTCCGACAAAGACCAAGTATCACGAGTATCAAGCCACTGTCCACTGTGCCACCTATGGCGTCAACAACGTCGCCGTCAATGAGATGAGCTCATGCGATGGCACCTGGTCCACGACAGGCAATATGCCGTCAAGACCGGTGTTCGATCCAACTCAGGGTGTTGTGTTCCCAAACACGACGGCTACAGATGGTTACGCATCCATGTATATCACCAGAGGATATGGTGGAGTCAAGCCCTCGTTCTGTTTGGATGTGTGGTTCAAGCCTCTGACAGCCTACAATGGCGACAAGAACATCGTCCAGCTGGGCAATCCCAACTCTGCTGATGGTCGTGCGCATATCGCTCTGAACAACGGCAAGCTGAAGGCTTACGGCTGTCCATACACCACATCCACGGCTGTCACACTGAATGGCACGACAACACTAAACAACAATCAGTGGTATCTGGCAACCCTGGCTTGTGATGTGCTCGGACGTGAGTGGCGCCTGTATCTGGATGGAGCTCTTGAGGCTAGCATCTCTGATCCGAATCTTGCGCCTATGGCACTTCCAGCGATGAGCTCAATGCCCTACATCATCCTGGGTGGACGCCATCCATTGAGCAGTGCAACTGGTACGATCCCATCATTCCATGGAATCATTGGTGCGACACGATTGACTATCAATGGCCCTCGCTACTACAGCGGTTTCACGCCCACAGGCATCGGTGCATGGGACACACTACCGGCTCGACCTGCCGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3336145416cfdb63e678d46f419da5b1cefdbc09f5b8f9f68aecbe00b0465c23
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5673
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Stenotrophomonas maltophilia phage Marzo Patel,J., Godoy,B., Clark,J., Liu,M. and Young,R. 2022-03-17 — GenBank